Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN001898000
- symbol?: —
- synonym:
- description?: acetyl-CoA acyltransferase
- acetyl-CoA acyltransferase
- acetyl-CoA acetyltransferase
- acetyl-CoA acetyltransferase, putative
- acetyl-CoA C-acetyltransferase
- 3-ketoacyl-CoA thiolase
- acetyl-CoA acetyltransferase (Acetoacetyl-CoA thiolase)
- acetyl-CoA acetyltransferase protein
- acetyl-CoA C-acetyltransferase homologue
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2385115..2386293
- synteny block?: BlockID0012710
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0352
08BA02176:
C248_0409 (thl)
11819-97:
MS7_0344 (thlA)
6850:
RSAU_000299
71193:
ST398NM01_0434
ECT-R 2:
ECTR2_315
ED133:
SAOV_0378
ED98:
SAAV_0322
HO 5096 0412:
SAEMRSA15_03090 (thl)
JH1:
SaurJH1_0412
JH9:
SaurJH9_0402
JKD6008:
SAA6008_00331 (paaJ)
JKD6159:
SAA6159_00328 (paaJ)
LGA251:
SARLGA251_03160 (thl)
M013:
M013TW_0333
MRSA252:
SAR0351 (thl)
MSHR1132:
SAMSHR1132_03270
MSSA476:
SAS0330
Mu3:
SAHV_0351
Mu50:
SAV0354
MW2:
MW0330
RF122:
SAB0304 (th1)
ST398:
SAPIG0434
T0131:
SAT0131_00361 (infC)
TCH60:
HMPREF0772_10140 (atoB)
TW20:
SATW20_04220 (thl)
USA300_TCH1516:
USA300HOU_0375
VC40:
SAVC_01520
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTRVVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAG
N315 MTRVVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAG
NCTC8325 MTRVVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAG
Newman MTRVVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAG
USA300_FPR3757 MTRVVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAG
************************************************************
COL QGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQ
N315 QGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQ
NCTC8325 QGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQ
Newman QGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQ
USA300_FPR3757 QGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQ
************************************************************
COL SPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLAEQYGISREEQDTFAV
N315 SPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLVEQYGISREEQDTFAV
NCTC8325 SPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLVEQYGISREEQDTFAV
Newman SPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLVEQYGISREEQDTFAV
USA300_FPR3757 SPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLVEQYGISREEQDTFAV
********************************************.***************
COL NSQQKAVRAQQNGEFDSEIVPVSIPQRKGEPIVVTKDEGVRENVSVEKLSRLRPAFKKDG
N315 NSQHKAVRAQQNGEFDSEIVPVSIPQRKGEPILVTKDEGVRENVSVEKLSRLRPAFKKDG
NCTC8325 NSQQKAVRAQQNGEFDSEIVPVSIPQRKGEPIVVTKDEGVRENVSVEKLSRLRPAFKKDG
Newman NSQQKAVRAQQNGEFDSEIVPVSIPQRKGEPIVVTKDEGVRENVSVEKLSRLRPAFKKDG
USA300_FPR3757 NSQQKAVRAQQNGEFDSEIVPVSIPQRKGEPIVVTKDEGVRENVSVEKLSRLRPAFKKDG
***:****************************:***************************
COL TVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKA
N315 TVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKA
NCTC8325 TVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKA
Newman TVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKA
USA300_FPR3757 TVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKA
************************************************************
COL LKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLV
N315 LKRSKKELSDIDVFELNEAFAAQLLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLV
NCTC8325 LKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLV
Newman LKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLV
USA300_FPR3757 LKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLV
*********************** ************************************
COL TLLHQLNDEVETGLTSLCIGGGQAIAAVVSKYK
N315 TLLHQLNDEVETGLTSLCIGGGQAIAAVVSKYK
NCTC8325 TLLHQLNDEVETGLTSLCIGGGQAIAAVVSKYK
Newman TLLHQLNDEVETGLTSLCIGGGQAIAAVVSKYK
USA300_FPR3757 TLLHQLNDEVETGLTSLCIGGGQAIAAVVSKYK
*********************************