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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001695000
- symbol?: —
- synonym:
- description?: phage tape measure protein
- strand?: -
- coordinates?: 2032406..2035870
- synteny block?: BlockID0011170
- occurrence?: in 6% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
—
JH1:
—
JH9:
—
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
—
VC40:
—
⊟Genome Viewer[edit | edit source]
| NCTC8325 | |
| Newman |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
NCTC8325 MTEYKIKATIEASVAKFKRQIDSAVKSVQRFKRVADQTKDVELNANDKNLQKTIKVAKKS
Newman MTEYKIKATIEASVAKFKRQIDSAVKSVQRFKRVADQTKDVELNADDKKLQKTIKVAKKS
*********************************************:**:***********
NCTC8325 LDAFSNKNVKAKLDASIQDLQQKVLESNFELDKLNSKEVTPEVKLQKQKLIKDIAETEAK
Newman LDAFSNKKVKAKLDASIQDLQQKVLESNFELDKLNSKEVTPEIKLQKQKLTKDIAEAEAK
*******:**********************************:******* *****:***
NCTC8325 LSELEKKRVNIDVNADNSKFNRVLKVSKASLEALNRSKAKAIIDVDNGVANSKIKRTKEE
Newman LSELEKKRVNIDINADNSKFNRVLKVSKASLEALNRSKAKAIIDVDNGVANSKIKRTKEE
************:***********************************************
NCTC8325 LKSIPNKTRSRLDVDTGLSIPTIYAFKKSLDALPNKKTTKVDVDTNGLKKAYAYIIKAND
Newman LKSIPNKTRSRLDVDTGLSIPTIYAFKKSLDALPNKKTTKVDVDTNGLKKAYAYIIKVND
*********************************************************.**
NCTC8325 NFQRQMGNLANMFRVFGTVGSNMVGGLLTSSFSILIPVIASVVPVVFALLNAIKVLTGGV
Newman NFQRQMGNLANMFRVFGTVGSNMVGGLLTSSFSILIPVIASVVPVVFALLNAIKVLTGGV
************************************************************
NCTC8325 LALGGAVAIAGAGFVAFGAMAISAIKMLNDGTLQASSATNEYKKALDGVKSAWTDIIKQN
Newman LALGGAVAIAGAGFVAFGAMAISAIKMLSDGTLQASSATNEYKKALDGVKSAWTDIIKQN
****************************.*******************************
NCTC8325 QSAIFTTLANGLNTVKTAMQSLQPFFSGISRGMEEASQSVLKWAENSSVASRFFNMMNTT
Newman QSAIFTTLANGLNTVKTAMQSLQPFFSGISRGMEEASQSVLKWAQNSGVASRFFNMMNTT
********************************************:**.************
NCTC8325 GVSVFNKLLSAAGGFGDGLVNVFTQLAPLFQWSADWLDRLGQSFSNWANSAAGENSITRF
Newman GVSVFNKLLSAAGGFGDGLVNVFTQLAPLFQWSADWLDRLGQSFSNWANSAAGENSITRF
************************************************************
NCTC8325 IEYTKTNLPIIGNIFKNVFVGINNLMNAFSGSSTGIFQSLEQMTAKFREWSEQVGQSQGF
Newman IEYTKTNLPIIGNIFKNVFVGINNLMNAFSGSSTGIFQSLEQMTAKFREWSEQVGQSQGF
************************************************************
NCTC8325 KDFVSYIQTNGPLIMQLIGNIARGLVAFATAMAPIASAVLRVAVAITGWIANLFEAHPAT
Newman KDFVSYIQTNGPLIMQLIGNIARGLVAFATAMAPIASAVLRVAVAITGWIANLFEAHPAT
************************************************************
NCTC8325 AQLVGVIITLVGAFRFLIPIILAVSNFMGGGLIGRIIALVSKFGLLRAGLTILKGAFMLL
Newman AQLVGVIITLVGAFRFLIAPILAVMDFL-GPLAARLVALVTKFGWAKTGTLVLSKAMTSL
******************. **** :*: * * .*::***:*** ::* :*. *: *
NCTC8325 KGPLKIISVIFQLLFGKIGLIRNAITGLVTVFGILGGPITIVIGVIAALIAIFVLLWNKN
Newman KGPIKLVTAIFQLLFGKIGLIRNAITGLVTVFGILGGPITIVIGVIAALIAIFVLLWNKN
***:*:::.***************************************************
NCTC8325 EGFRNFIINAWNAIKTFMVNVWNVLKAVASVVWNAILTAITTAVSNVYNFIMIVWNQIVA
Newman EGFRNFIINVWNAIKTFMVTVWNVLKTVASVVWNAILKAITTAVSNVYNFIMIIWNQIVA
*********.*********.******:**********.***************:******
NCTC8325 YLQGLWNGIIAIATTVWNLLVTIITTVFTTIMTIVMTIWTAIWTFLSTIWNTIITIATTI
Newman YLQGLWNGIIAIATTVWNLLVTIITTVFTTIMTIVMTIWTAIWTFLSTIWNTIITIATTI
************************************************************
NCTC8325 WNLLVTVITTVFTTIMTIAITIWNAIWTFLQTLWNTIVTVATKVWNAITTAISTALQAAW
Newman WNLLVTVITTVFTTIMTIAMTIWNAIWTFLQTLWNTIVTVATKVWNAITTTISTALQAAW
*******************:******************************:*********
NCTC8325 SFISNIWNTIWSFLSGILTTIWNKVVSIFTQVVSTISDKMSQAWNFIVTKGMQWVSTITS
Newman SFISNIWNTIWSFLSGILTTIWNKVVSIFTQVVSTISDKMSQAWNFIVTKGMQWVSTITS
************************************************************
NCTC8325 TLINFVNRVVQGFVNVVNKVSQGMTNAVNKVKSFVDDFVSAGADMIRGLMRGIGNMARDL
Newman TLINFVNRVIQGFVNVVNKVSQGMTNAVNKIKSFIGDFVSAGADMIRGLIRGIGQMAGQL
*********:********************:***:.*************:****:** :*
NCTC8325 AEKAASVAKGALNAAKRALGIHSPSREFMDVGMYSMLGFVKGIDNHSSKVIRNVSNVADK
Newman VDAAKNVAKKALDAAKSALGIHSPSREFMDVGMYSMLGFVKGIDNHSSKVIRNVSNVADK
.: * .*** **:*** *******************************************
NCTC8325 VVDAFQPTLNAPDISSITGNLSNLGGNINAQVQHTHSIETSPNMKTVKVEFDVNNDALTS
Newman VVDAFQPTLNAPDISSITGNLSNLGGNINAQVQHTHSIETSPNMKTVKVEFDVNNDALTS
************************************************************
NCTC8325 IVNGRNAKRNSEYYL
Newman IVNGRNAKRNSEYYL
***************