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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001223000
- symbol?: —
- synonym:
- description?: formate/nitrite transporter
- formate/nitrite transporter
- formate/nitrite transporter family protein
- formate/nitrite transporter, putative
- FNT family formate-nitrite transporter
- formate/nitrate transporter
- formate-nitrite transporter
- putative formate/nitrite transporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1510673..1511369
- synteny block?: BlockID0007340
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0304
08BA02176:
C248_0293
11819-97:
MS7_0295
6850:
RSAU_000251
71193:
ST398NM01_0318
ECT-R 2:
ECTR2_265
ED133:
SAOV_0257
ED98:
SAAV_0272
HO 5096 0412:
SAEMRSA15_02610
JH1:
SaurJH1_0295
JH9:
SaurJH9_0288
JKD6008:
SAA6008_00281
JKD6159:
SAA6159_00280
LGA251:
SARLGA251_02670
M013:
M013TW_0286
MRSA252:
SAR0302
MSHR1132:
SAMSHR1132_02790
MSSA476:
SAS0282
Mu3:
SAHV_0302
Mu50:
SAV0305
MW2:
MW0282
RF122:
SAB0242c
ST398:
SAPIG0318
T0131:
SAT0131_00305 (lldP)
TCH60:
HMPREF0772_10191
TW20:
SATW20_03100
USA300_TCH1516:
USA300HOU_0324
VC40:
SAVC_01275
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKSEDVIVKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAMMAGFIIGII
N315 -------MKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAMMAGFIIGII
NCTC8325 -------MKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAMMAGFIIGII
Newman MKSEDVIVKEKHIKWDKIFYGDDWVNNVVETIRTKDILQSVYLKRYLLRAMMAGFIIGII
USA300_FPR3757 --------------------------------------------------MMAGFIIGII
**********
COL TVFVLSVKATHEPDLPPGIVNMASAITFSFALVLILFTNSELLTSNFMYFTVGLYYKVIK
N315 TVFVLSVKATHEPDLPPGIVNMASAITFSFALVLILFTNSELLTSNFMYFTVGLYYKVIK
NCTC8325 TVFVLSVKATHEPDLPPGIVNMASAITFSFALVLILFTNSELLTSNFMYFTVGLYYKVIK
Newman TVFVLSVKATHEPDLPPGIVNMASAITFSFALVLILFTNSELLTSNFMYFTVGLYYKVIK
USA300_FPR3757 TVFVLSVKATHEPDLPPGIVNMASAITFSFALVLILFTNSELLTSNFMYFTVGLYYKVIK
************************************************************
COL PTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQLSAVIEHKTLSTGFVSILMKA
N315 PTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQLSAVIEHKTLSTGFVSILMKA
NCTC8325 PTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQLSAVIEHKTLSTGFVSILMKA
Newman PTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQLSAVIEHKTLSTGFVSILMKA
USA300_FPR3757 PTRVLKIFLLCFAGNILGAAILFSFMRFSNVMTPDMLNQLSAVIEHKTLSTGFVSILMKA
************************************************************
COL IFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLFMGGLIYQVDTL
N315 IFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLFMGGLIYQVDTL
NCTC8325 IFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLFMGGLIYQVDTL
Newman IFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLFMGGLIYQVDTL
USA300_FPR3757 IFANFFINISLVIAMQIDDVLAKMFVMMFGVTIFAFMGYEHVVYNSCLFMGGLIYQVDTL
************************************************************
COL HFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN
N315 HFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN
NCTC8325 HFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN
Newman HFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN
USA300_FPR3757 HFIPAISNIAAAFIGNYIGGGLIIGLFYAYLNDHHQFYKNN
*****************************************