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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000942000
- symbol?: sodM
- synonym:
- description?: Superoxide dismutase [Mn/Fe] 2
- Superoxide dismutase [Mn/Fe] 2
- superoxide dismutase
- Fe/Mn family superoxide dismutase
- superoxide dismutase, putative
- manganese/iron superoxide dismutase
- Manganese superoxide dismutase
- Manganese superoxide dismutase, Superoxide dismutase
- Superoxide dismutase (Fe)
- Superoxide dismutase (Mn/Fe family)
- superoxide dismutase [Mn] (General stress protein 24)(GSP24)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1203434..1203997
- synteny block?: BlockID0004780
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0134 (sodM)
08BA02176:
C248_0122 (sodM)
11819-97:
MS7_0124 (sodM)
6850:
RSAU_000087 (sodA)
71193:
ST398NM01_0147
ECT-R 2:
ECTR2_89
ED133:
SAOV_0081 (sodA)
ED98:
SAAV_0101 (sodA1)
HO 5096 0412:
SAEMRSA15_01000 (sodM)
JH1:
SaurJH1_0124
JH9:
SaurJH9_0119
JKD6008:
SAA6008_00111 (sodM)
JKD6159:
SAA6159_00116 (sodM)
LGA251:
SARLGA251_01080 (sodM)
M013:
M013TW_0123
MRSA252:
SAR0135 (sodM)
MSHR1132:
SAMSHR1132_01090
MSSA476:
SAS0107
Mu3:
SAHV_0132 (sodM)
Mu50:
SAV0133 (sodM)
MW2:
MW0107 (sodM)
RF122:
SAB0072 (sodM)
ST398:
SAPIG0147
T0131:
SAT0131_00121
TCH60:
HMPREF0772_10365 (sodA)
TW20:
SATW20_01440 (sodM)
USA300_TCH1516:
USA300HOU_0145 (sodM)
VC40:
SAVC_00405
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAFKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANL
N315 MAFKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANL
NCTC8325 MAFKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANL
Newman MAFKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANL
USA300_FPR3757 MAFKLPNLPYAYDALEPYIDQRTMEFHHDKHHNTYVTKLNATVEGTELEHQSLADMIANL
************************************************************
COL DKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDDIKAQWGTLDEFKNEFANKA
N315 DKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDDIKAQWGTLDEFKNEFANKA
NCTC8325 DKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDDIKAQWGTLDEFKNEFANKA
Newman DKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDDIKAQWGTLDEFKNEFANKA
USA300_FPR3757 DKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDDIKAQWGTLDEFKNEFANKA
************************************************************
COL TTLFGSGWTWLVVNDGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMT
N315 TTLFGSGWTWLVVNDGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMT
NCTC8325 TTLFGSGWTWLVVNDGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMT
Newman TTLFGSGWTWLVVNDGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMT
USA300_FPR3757 TTLFGSGWTWLVVNDGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMT
************************************************************
COL AFWNIVNWKKVDELYQAAK
N315 AFWNIVNWKKVDELYQAAK
NCTC8325 AFWNIVNWKKVDELYQAAK
Newman AFWNIVNWKKVDELYQAAK
USA300_FPR3757 AFWNIVNWKKVDELYQAAK
*******************