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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000913000
- symbol?: sirA
- synonym:
- description?: iron ABC transporter substrate-binding protein
- iron ABC transporter substrate-binding protein
- iron compound ABC transporter iron compound-binding protein SirA
- iron-regulated ABC transporter, lipoprotein SirA
- lipoprotein
- periplasmic binding protein
- siderophore compound ABC transporter binding protein
- staphyloferrin B ABC transporter substrate-binding protein SirA
- Siderophore staphylobactin ABC transporter, substrate-binding protein SirA
- disulfide bond formation regulator protein SirA
- iron (Fe3+) ABC superfamily ATP binding cassette transporter, binding protein
- iron (Fe3+) ABC transporter binding protein
- iron compound ABC transporter, iron compound-binding protein SirA
- iron-regulated ABC transporter siderophore-binding protein SirA
- iron-regulated lipoprotein
- periplasmic binding family protein
- Staphylobactin-binding protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1181645..1182619
- synteny block?: BlockID0004500
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0116 (sirA)
08BA02176:
C248_0103 (sirA)
11819-97:
MS7_0107 (sirA)
6850:
RSAU_000069 (sirA)
71193:
ST398NM01_0126
ECT-R 2:
ECTR2_71
ED133:
SAOV_0062 (sirA)
ED98:
SAAV_0083 (sirA)
HO 5096 0412:
SAEMRSA15_00810 (sirA)
JH1:
SaurJH1_0106
JH9:
SaurJH9_0102
JKD6008:
SAA6008_00093 (sirA)
JKD6159:
SAA6159_00098 (sirA)
LGA251:
SARLGA251_00900 (sirA)
M013:
M013TW_0105
MRSA252:
SAR0118 (sirA)
MSHR1132:
SAMSHR1132_00910
MSSA476:
SAS0089
Mu3:
SAHV_0114 (sirA)
Mu50:
SAV0115 (sirA)
MW2:
MW0088 (sirA)
RF122:
SAB0054c (sirA)
ST398:
SAPIG0126
T0131:
SAT0131_00101 (mecR1)
TCH60:
HMPREF0772_10382 (sirA)
TW20:
SATW20_01270 (sirA)
USA300_TCH1516:
USA300HOU_0126 (sirA)
VC40:
SAVC_00315
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLY
N315 MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLY
NCTC8325 MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLY
Newman MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLY
USA300_FPR3757 MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETTSIKHAMGTTEIKGKPKRVVTLY
************************************************************
COL QGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIV
N315 QGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIV
NCTC8325 QGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIV
Newman QGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIV
USA300_FPR3757 QGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIV
************************************************************
COL ASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQ
N315 ASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQ
NCTC8325 ASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQ
Newman ASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQ
USA300_FPR3757 ASKVRNEKVYDQLSKIAPTVSTDTVFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQ
************************************************************
COL KDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQ
N315 KDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQ
NCTC8325 KDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQ
Newman KDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQ
USA300_FPR3757 KDAKAKYKDAWPLKASVVNFRADHTRIYAGGYAGEILNDLGFKRNKDLQKQVDNGKDIIQ
************************************************************
COL LTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDE
N315 LTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDE
NCTC8325 LTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDE
Newman LTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDE
USA300_FPR3757 LTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDE
************************************************************
COL ITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
N315 ITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
NCTC8325 ITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
Newman ITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
USA300_FPR3757 ITWNLAGGYKSSLKLIDDLYEKLNIEKQSK
******************************