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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL_RS01635 [old locus tag: SACOL0325 ]
- pan locus tag?: SAUPAN001425000
- symbol: SACOL_RS01635
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL_RS01635 [old locus tag: SACOL0325 ]
- symbol: SACOL_RS01635
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 358916..359707
- length: 792
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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781ATGCAAGCATTACAAACATTTAATTTTAAAGAGCTACCAGTAAGAACAGTAGAAATTGAA
AACGAACCTTATTTTGTAGGAAAAGATATTGCTGAGATTTTAGGATATGCAAGATCAGAC
AATGCCATTAGAAATCATGTTGATAGCGAGGACAAGCTGACGCACCAATTTAGTGCATCA
GGTCAAAACAGAAATATGATCATTATCAACGAATCAGGATTATACAGTCTAATCTTCGAT
GCTTCTAAACAAAGCAAAAACGAAAAAATCAGAGAAACCGCTCGGAAATTCAAACGATGG
GTAACATCAGATGTCCTACCAGCTATTCGCAAACACGGTATATACGCAACAGACAATGTA
ATTGAACAAACATTAAAAGATCCAGACTACATCATTACAGTGTTGACTGAGTATAAGAAA
GAAAAAGAGCAAAACTTACTTTTACAACAAGAAATCGGAGAACTAAAACCCAAAGCAGAC
TATGTAGATGAAATCTTAAAGTCAACTGGCACATTAGCCACAACTCAAATCGCGGCAGAC
TACGGTATATCAGCACAAAAGTTAAACAAACTACTACACGAAGCTAGACTACAACGAAAA
GTAAATAAACAGTGGGTGCTTTACTCAGAACACATGGGCAAGAGTTACACAGAATCAGAC
ACTATAGCAATTGTACGCTCTGACGGTAGAGAAGACACAGTTTTACAAACTAGATGGACA
CAAAAAGGCAGATTGAAAATACATGAAATCATGACTGAATTCGGTTATGAAGCTAATTTA
GGGGGAGCGTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL_RS01635 [old locus tag: SACOL0325 ]
- symbol: SACOL_RS01635
- description: hypothetical protein
- length: 263
- theoretical pI: 7.18406
- theoretical MW: 30156.9
- GRAVY: -0.601521
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SACOL0325
- PFAM: no clan defined ANT; Phage antirepressor protein KilAC domain (PF03374; HMM-score: 101.6)Bro-N; BRO family, N-terminal domain (PF02498; HMM-score: 96)and 3 moreP22_AR_N; P22_AR N-terminal domain (PF10547; HMM-score: 19.3)HTH (CL0123) AbiEi_4; Transcriptional regulator, AbiEi antitoxin (PF13338; HMM-score: 12.7)HTH_DeoR; DeoR-like helix-turn-helix domain (PF08220; HMM-score: 12.3)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.004627
- TAT(Tat/SPI): 0.000295
- LIPO(Sec/SPII): 0.000424
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MQALQTFNFKELPVRTVEIENEPYFVGKDIAEILGYARSDNAIRNHVDSEDKLTHQFSASGQNRNMIIINESGLYSLIFDASKQSKNEKIRETARKFKRWVTSDVLPAIRKHGIYATDNVIEQTLKDPDYIITVLTEYKKEKEQNLLLQQEIGELKPKADYVDEILKSTGTLATTQIAADYGISAQKLNKLLHEARLQRKVNKQWVLYSEHMGKSYTESDTIAIVRSDGREDTVLQTRWTQKGRLKIHEIMTEFGYEANLGGA
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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