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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL2186
- pan locus tag?: SAUPAN005592000
- symbol: SACOL2186
- pan gene symbol?: lacA
- synonym:
- product: galactose-6-phosphate isomerase subunit LacA
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL2186
- symbol: SACOL2186
- product: galactose-6-phosphate isomerase subunit LacA
- replicon: chromosome
- strand: -
- coordinates: 2268445..2268873
- length: 429
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3238604 NCBI
- RefSeq: YP_186997 NCBI
- BioCyc: SACOL_RS15240 BioCyc
- MicrobesOnline: 913671 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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421ATGGCGATTATTATTGGTTCAGATGAAGCTGGCAAACGATTAAAAGAAGTCATCAAATCA
TACTTATTAGACAATAAATATGATGTTGTTGACGTAACAGAAGGACAGGAAGTTGACTTT
GTTGATGCAACTTTGGCTGTAGCAAAAGATGTTCAAAGTCAAGAAGGTAACTTAGGTATT
GTTATCGATGCATTTGGTGCAGGTAGCTTTATGGTTGCTACAAAAATCAAAGGCATGATT
GCTGCTGAAGTATCAGATGAACGCTCTGGATATATGACTAGAGGCCATAACAATTCAAGA
ATGATCACTATGGGATCTGAAATTGTTGGAGACACATTAGCGAAAAATGTCGTTAAAGGT
TTTGTTGAAGGTAAATACGATGGTGGTAGACACCAAATCCGCGTAGATATGCTTAATAAA
ATGTGCTAA60
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429
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL2186
- symbol: SACOL2186
- description: galactose-6-phosphate isomerase subunit LacA
- length: 142
- theoretical pI: 4.96862
- theoretical MW: 15394.5
- GRAVY: -0.105634
⊟Function[edit | edit source]
- ⊞reaction: EC 5.3.1.26? ExPASy
- ⊞TIGRFAM: Energy metabolism Biosynthesis and degradation of polysaccharides galactose-6-phosphate isomerase, LacA subunit (TIGR01118; EC 5.3.1.26; HMM-score: 284.6)and 4 more
- TheSEED :
- Galactose-6-phosphate isomerase, LacA subunit (EC 5.3.1.26)
- ⊞PFAM: no clan defined LacAB_rpiB; Ribose/Galactose Isomerase (PF02502; HMM-score: 132.5)and 2 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MAIIIGSDEAGKRLKEVIKSYLLDNKYDVVDVTEGQEVDFVDATLAVAKDVQSQEGNLGIVIDAFGAGSFMVATKIKGMIAAEVSDERSGYMTRGHNNSRMITMGSEIVGDTLAKNVVKGFVEGKYDGGRHQIRVDMLNKMC
⊟Experimental data[edit | edit source]
- experimentally validated: data available for NCTC8325
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for N315
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available