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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA1258 [new locus tag: SA_RS07135 ]
- pan locus tag?: SAUPAN003857000
- symbol: SA1258
- pan gene symbol?: fakB2
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA1258 [new locus tag: SA_RS07135 ]
- symbol: SA1258
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 1431052..1431891
- length: 840
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1124096 NCBI
- RefSeq: NP_374539 NCBI
- BioCyc: see SA_RS07135
- MicrobesOnline: 103565 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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781ATGACAAAACAGATTATAGTAACAGACTCAACATCCGATTTATCTAAAGAATACTTAGAA
GCAAACAACATTCATGTAATTCCTTTAAGTTTAACTATTGAAGGAGCTTCATACGTTGAC
CAAGTAGATATTACATCAGAAGAATTTATTAATCATATTGAAAATGATGAAGATGTAAAG
ACAAGTCAGCCAGCCATAGGTGAATTTATATCTGCTTATGAAGAACTAGGAAAAGATGGC
TCTGAAATCATAAGTATTCATCTTTCTTCAGGATTAAGTGGTACATATAACACTGCTTAC
CAAGCAAGTCAAATGGTAGATGCTAATGTAACTGTTATTGATTCAAAATCTATTTCTTTT
AGTTTAGGGTATCAAATACAACACCTAGTAGAGCTTGTAAAAGAAGGTGTCTCAACTTCT
GAAATAGTTAAAAAGTTAAATCATTTAAGAGAAAACATTAAATTATTTGTAGTTATAGGG
CAATTGAATCAATTAATTAAAGGTGGCAGAATTAGTAAAACAAAAGGTTTGATTGGTAAT
CTTATGAAAATTAAACCAATTGGTACACTTGATGATGGTCGCTTAGAGCTTGTGCACAAT
GCGAGAACTCAAAATTCTAGTATCCAATACTTGAAAAAGGAAATTGCTGAATTTATAGGA
GATCATGAAATCAAATCCATTGGTGTCGCACATGCTAACGTCATTGAATATGTTGATAAA
TTGAAGAAAGTTTTTAACGAAGCTTTTCATGTGAATAATTACGATATAAATGTAACTACA
CCAGTTATTTCTGCACATACTGGTCAAGGTGCGATTGGCCTCGTAGTCCTTAAGAAGTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA1258 [new locus tag: SA_RS07135 ]
- symbol: SA1258
- description: hypothetical protein
- length: 279
- theoretical pI: 5.7835
- theoretical MW: 30674.7
- GRAVY: -0.0935484
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: -1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.003441
- TAT(Tat/SPI): 0.000229
- LIPO(Sec/SPII): 0.000313
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDVKTSQPAIGEFISAYEELGKDGSEIISIHLSSGLSGTYNTAYQASQMVDANVTVIDSKSISFSLGYQIQHLVELVKEGVSTSEIVKKLNHLRENIKLFVVIGQLNQLIKGGRISKTKGLIGNLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEFIGDHEIKSIGVAHANVIEYVDKLKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVVLKK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
Joshua B Parsons, Tyler C Broussard, Jeffrey L Bose, Jason W Rosch, Pamela Jackson, Chitra Subramanian, Charles O Rock
Identification of a two-component fatty acid kinase responsible for host fatty acid incorporation by Staphylococcus aureus.
Proc Natl Acad Sci U S A: 2014, 111(29);10532-7
[PubMed:25002480] [WorldCat.org] [DOI] (I p)