NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS04445 [old locus tag: NWMN_0786 ]
- pan locus tag?: SAUPAN002895000
- symbol: NWMN_RS04445
- pan gene symbol?: sufD
- synonym:
- product: Fe-S cluster assembly protein SufD
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS04445 [old locus tag: NWMN_0786 ]
- symbol: NWMN_RS04445
- product: Fe-S cluster assembly protein SufD
- replicon: chromosome
- strand: +
- coordinates: 875281..876588
- length: 1308
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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1261ATGACAACTGATATTTTGAACATTTCTGAAGAACAACTTGTTGATTATTCTAAAGCCCAC
AATGAACCTTCTTGGATGACAGAATTACGTAAAAAAGCTTTGAAATTAACAGAAACTTTA
GAAATGCCAAAACCTGATAAAACAAAATTAAGAAAATGGGATTTTGATTCTTTTAAACAA
CACGATGTAAAAGGTGATGTTTATCAATCTTTATCACAATTACCTGAGTCAGTAAGAGAA
ATTATTGACGTAGATCATTCTAAAAACTTAGTAATTCAACATAATAATACGATTGCGTAC
ACACAAGTTGATGATAATGCATCGAAAGATGGCGTTATCGTTGAAGGTTTAGCAGACGCT
CTTATGAACCATAGTGATTTAGTACAAAAGTACTTTATGAAAGATGCAGTAACAGTAGAT
GAACATCGTATCACAGCGCTACACACGGCATTAGTTAATGGTGGCGTATTTGTTTATGTT
CCTAAAAATGTAGTTGTAGAACATCCAGTACAATACGTTGTGTTGCACGACGACGAAAAT
GCAAGCTTTTATAACCATGTTATCATCGTTACTGAAGAAAGCGCCGAAGTCACATATGTT
GAAAATTACTTATCAAATGCATCTGGTGAAGGAAATCAATTAAATATTATTTCTGAAGTG
ATTGCTGGTGCAAATTCAAATATCACATATGGCTCAGTGGACTATATGGATAAAGGCTTT
ACAGGTCATATCATTCGACGTGGTATTACTGAAGCGGATGCCTCAATTAATTGGGCACTA
GGTTTAATGAATGAGGGTAGCCAAATTATTGATAATACAACAAATTTATTTGGTGATCGT
TCAACAAGTTCACTTAAATCAGTAGTTGTAGGTACAGGCGAACAAAAAATTAATCTAACA
TCTAAAATCGTACAATATGGTAAAGAAACAGATGGTTATATCCTTAAACATGGTGTTATG
AAAGAACATGCATCGTCTGTATTTAATGGTATCGGCTACATTAAGCATGGTGGAACTAAA
TCAATTGCTAATCAGGAATCACGTGTATTAATGTTATCTGAACATGCTCGTGGTGACGCG
AATCCTATTTTATTAATTGATGAAGATGATGTACAAGCTGGTCATGCTGCATCAGTAGGT
CGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCG
GAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGAC
GTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS04445 [old locus tag: NWMN_0786 ]
- symbol: NWMN_RS04445
- description: Fe-S cluster assembly protein SufD
- length: 435
- theoretical pI: 5.20929
- theoretical MW: 48548.3
- GRAVY: -0.353103
⊟Function[edit | edit source]
- TIGRFAM: Biosynthesis of cofactors, prosthetic groups, and carriers Other FeS assembly protein SufD (TIGR01981; HMM-score: 239.2)Biosynthesis of cofactors, prosthetic groups, and carriers Other FeS assembly protein SufB (TIGR01980; HMM-score: 232.9)
- TheSEED: see NWMN_0786
- ⊞PFAM: no clan defined SUFBD_core; SUF system FeS cluster assembly, SufBD core domain (PF01458; HMM-score: 218.2)and 2 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTTDILNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQHDVKGDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQLREVIERKVSK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: PerR*, SigB see NWMN_0786
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available