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⊟Summary[edit | edit source]

  • pan ID?: SAUPAN006197000
  • symbol?: cidB
  • synonym:
  • ⊟description?: holin-like protein CidB

      descriptions from strain specific annotations:

    • holin-like protein CidB
    • LrgB family protein
    • LrgB-like protein
    • CidA-associated membrane protein CidB
    • lrgB-like family protein
    • putative murein hydrolase subunit LrgB_1
  • strand?: -
  • coordinates?: 6260364..6261053
  • synteny block?: BlockID0049210
  • occurrence?: in 100% of 34 strains

cidB (pftB, ysbB) : facilitated transporter antiholin-like subunit CidB [1]

• the relative contribution to programmed cell death of CidAB-mediated holin-like membrane integrity breakdown versus CidAB-facilitated import of pyruvate for CidC-mediated acidification is unclear

⊟Orthologs[edit | edit source]

    COL:
    SACOL2554
    N315:
    SA2328
    NCTC8325:
    SAOUHSC_02850
    Newman:
    NWMN_2439 (cidB)
    USA300_FPR3757:
    SAUSA300_2478 (cidB)
    JSNZ:
    JSNZ_002519
    04-02981:
    SA2981_2476 (cidB)
    08BA02176:
    C248_2597
    11819-97:
    MS7_2545 (cidB)
    6850:
    RSAU_002381
    71193:
    ST398NM01_2590
    ECT-R 2:
    ECTR2_2392
    ED133:
    SAOV_2584c
    ED98:
    SAAV_2606
    HO 5096 0412:
    SAEMRSA15_24430
    JH1:
    SaurJH1_2616
    JH9:
    SaurJH9_2563
    JKD6008:
    SAA6008_02577 (lrgB_1)
    JKD6159:
    SAA6159_02436 (lrgB_1)
    LGA251:
    SARLGA251_23150 (cidB)
    M013:
    M013TW_2512
    MRSA252:
    SAR2620
    MSHR1132:
    SAMSHR1132_23600
    MSSA476:
    SAS2426
    Mu3:
    SAHV_2524
    Mu50:
    SAV2540
    MW2:
    MW2461
    RF122:
    SAB2414c
    ST398:
    SAPIG2590
    T0131:
    SAT0131_02746 (glpP)
    TCH60:
    HMPREF0772_10651
    TW20:
    SATW20_26610 (cidB)
    USA300_TCH1516:
    USA300HOU_2532
    VC40:
    SAVC_11575

⊟Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757
JSNZ

⊟Alignments[edit | edit source]

  • ⊞alignment of orthologues:

  1. ↑ Maisem Laabei, Seána Duggan
    CidA and LrgA: a "Hole" Lot More than Programmed Cell Death.
    mBio: 2022, 13(3);e0076122
    [PubMed:35608302] [WorldCat.org] [DOI] (I p)    Teddy Charbonnier, Dominique Le Coq, Stephen McGovern, Magali Calabre, Olivier Delumeau, Stéphane Aymerich, Matthieu Jules
    Molecular and Physiological Logics of the Pyruvate-Induced Response of a Novel Transporter in Bacillus subtilis.
    mBio: 2017, 8(5);
    [PubMed:28974613] [WorldCat.org] [DOI] (I e)    Marat R Sadykov, Kenneth W Bayles
    The control of death and lysis in staphylococcal biofilms: a coordination of physiological signals.
    Curr Opin Microbiol: 2012, 15(2);211-5
    [PubMed:22221897] [WorldCat.org] [DOI] (I p)
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