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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS13905 [old locus tag: SAUSA300_2504 ]
- pan locus tag?: SAUPAN006232000
- symbol: SAUSA300_RS13905
- pan gene symbol?: oatA
- synonym:
- product: O-acetyltransferase OatA
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS13905 [old locus tag: SAUSA300_2504 ]
- symbol: SAUSA300_RS13905
- product: O-acetyltransferase OatA
- replicon: chromosome
- strand: -
- coordinates: 2708969..2710780
- length: 1812
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2708969..2710780) NCBI
- BioCyc: SAUSA300_RS13905 BioCyc
- MicrobesOnline: see SAUSA300_2504
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1801ATGGATACAAAAGACTTTAAACGTTTAGAAAAAATGTATTCCCCGCGATACTTACCTGGA
TTAGATGGATTGAGGGCATTCGCAGTTATAGGAATCATTATTTATCACTTGAATGCACAA
TGGTTAAGTGGGGGCTTTTTAGGAGTAGATACATTCTTCGTTATTTCAGGTTATTTAATA
ACAAGTTTGTTGATAAGTGAGTATTATCGGACGCAAAAAATCGATTTGCTAGAGTTTTGG
AAGCGACGATTGAAACGACTCATTCCGGCAGTGTTATTTTTAATCTGTGTCGTGCTTACG
TTCACACTGATATTTAAACCGGAATTGATTATACAAATGAAACGAGATGCTATTGCAGCT
ATATTCTATGTTTCAAACTGGTGGTACATTTCACAGAATGTAGATTATTTTAACCAATTT
GCTATTGAACCACTCAAACATTTATGGTCTTTAGCCATTGAAGAACAATTTTACTTGCTT
TTCCCATTGGTTATCACGTTCTTATTACATAGATTTAAACCGAGAAATATTATTCAAACG
CTATTTATTGTATCGTTGATTTCTTTAGGACTTATGATAGTGATTCATTTCATCACTGGA
GATAATTCACGTGTGTATTTTGGGACAGATACACGACTGCAAACTTTATTGCTTGGTTGT
ATATTAGCATTTATTTGGCCTCCGTTTGCTTTGAAAAAAGATATTTCTAAAAAGATTGTC
GTATCATTAGATATTATAGGGATATCTGGTTTTGCGGTTCTAATGACTTTGTTCTTTATA
GTTGGAGACCAAGATCAATGGATCTATAATGGAGGATTTTACATTATATCATTTGCAACT
TTATTCATTATTGCAATTGCGGTACATCCTTCTAGTTTATTTGCTAAATTTTTAAGTATG
AAACCTTTACTAATTATAGGTAAACGATCATATAGCTTATACTTATGGCATTATCCTATC
ATTGTTTTTGTGAACAGTTATTACGTACAAGGACAAATACCGGTATACGTTTATATTATA
GAAATTTTGTTAACAGCGTTAATGGCTGAAATTTCGTATCGCTTTATTGAAACACCTATA
CGTAAAAAAGGATTTAAAGCTTTTGCATTTTTACCTAAAAAGAAGGGGCAATTTGCTAGA
ACAGTGTTAGTTATCCTATTATTGGTTCCGTCTATCGTTGTGCTCAGTGGACAGTTTGAT
GCACTTGGCAAACAACATGAAGCCGAGAAGAAAGAGAAGAAGACGGAATTTAAAACAACG
AAGAAAAAAGTCGTTAAAAAAGATAAGCAAGAGGATAAGCAGACAGCGAATAGCAAAGAG
GATATTAAAAAGTCATCACCACTATTAATTGGTGACTCGGTCATGGTGGATATTGGTAAT
GTCTTTACTAAGAAAATACCAAATGCACAAATTGATGGTAAAGTTGGACGGCAACTCGTT
GATGCTACACCAATTGTGAAATCGCAATATAAAGACTATGCTAAAAAAGGTCAAAAAGTT
GTAGTAGAGCTTGGTACAAATGGGGCATTTACGAAAGATCAATTAAATGAACTATTGGAT
AGTTTTGGAAAAGCAGACATATATTTAGTTTCTATTAGAGTACCTAGAGATTATGAAGGT
AGAATAAATAAATTAATTTATGAGGCAGCTGAAAAGCGCTCTAATGTACATCTAGTCGAT
TGGTATAAAGCTTCTGCAGGTCATCCGGAATACTTTGCATATGACGGTATTCACTTAGAA
TATGCAGGTAGTAAAGCGCTGACTGATTTGATTGTAAAAACGATGGAAACACATGCTACA
AATAAGAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS13905 [old locus tag: SAUSA300_2504 ]
- symbol: SAUSA300_RS13905
- description: O-acetyltransferase OatA
- length: 603
- theoretical pI: 10.0029
- theoretical MW: 69098.1
- GRAVY: 0.222554
⊟Function[edit | edit source]
- TIGRFAM: Cellular processes Sporulation and germination stage III sporulation protein AF (TIGR02896; HMM-score: 5.1)
- TheSEED: see SAUSA300_2504
- PFAM: Acyl_transf_3 (CL0316) Acyl_transf_3; Acyltransferase domain (PF01757; HMM-score: 102.3)and 2 moreSGNH_hydrolase (CL0264) Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family (PF13472; HMM-score: 16.4)no clan defined DisA-linker; DisA bacterial checkpoint controller linker region (PF10635; HMM-score: 11.9)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 11
- DeepLocPro: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 0.9965
- Cell wall & surface Score: 0.0001
- Extracellular Score: 0.0033
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.002962
- TAT(Tat/SPI): 0.000138
- LIPO(Sec/SPII): 0.001129
- predicted transmembrane helices (TMHMM): 11
⊟Accession numbers[edit | edit source]
- GI: 446301966 NCBI
- RefSeq: WP_000379821 NCBI
- UniProt: see SAUSA300_2504
⊟Protein sequence[edit | edit source]
- MDTKDFKRLEKMYSPRYLPGLDGLRAFAVIGIIIYHLNAQWLSGGFLGVDTFFVISGYLITSLLISEYYRTQKIDLLEFWKRRLKRLIPAVLFLICVVLTFTLIFKPELIIQMKRDAIAAIFYVSNWWYISQNVDYFNQFAIEPLKHLWSLAIEEQFYLLFPLVITFLLHRFKPRNIIQTLFIVSLISLGLMIVIHFITGDNSRVYFGTDTRLQTLLLGCILAFIWPPFALKKDISKKIVVSLDIIGISGFAVLMTLFFIVGDQDQWIYNGGFYIISFATLFIIAIAVHPSSLFAKFLSMKPLLIIGKRSYSLYLWHYPIIVFVNSYYVQGQIPVYVYIIEILLTALMAEISYRFIETPIRKKGFKAFAFLPKKKGQFARTVLVILLLVPSIVVLSGQFDALGKQHEAEKKEKKTEFKTTKKKVVKKDKQEDKQTANSKEDIKKSSPLLIGDSVMVDIGNVFTKKIPNAQIDGKVGRQLVDATPIVKSQYKDYAKKGQKVVVELGTNGAFTKDQLNELLDSFGKADIYLVSIRVPRDYEGRINKLIYEAAEKRSNVHLVDWYKASAGHPEYFAYDGIHLEYAGSKALTDLIVKTMETHATNKK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]