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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS10710 [old locus tag: SAUSA300_1952 ]
- pan locus tag?: SAUPAN001386000
- symbol: SAUSA300_RS10710
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS10710 [old locus tag: SAUSA300_1952 ]
- symbol: SAUSA300_RS10710
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2112993..2113364
- length: 372
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2112993..2113364) NCBI
- BioCyc: SAUSA300_RS10710 BioCyc
- MicrobesOnline: see SAUSA300_1952
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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361ATGAAAGTGAACTATGAAACAGGATTCCAAATAGGCGTAATGGAAGCTAGGTTGAAGAAG
ATGAGAAAACAACGTGATGAGTACAAGAAGCAACGTGACGAGCTTATTGGGGATATAGCT
AAGTTAAGAGAGCGTAACGAAGAGCTGGAGAACATGTGGCGCACGCTTAAAAATGAATTG
TTTGGAAGATACGAATTTTACCGTTTTAGACTTAGCGAACTACAGATTGAGAGCAGAGCG
AACAAGGAAGTAGCTATATATAGAAGAGCTGAAATCAACTTAAGTGTTATATTGTGCCGA
ATGGACAAACTAGACGGAACAAATGAGTTCTACGAATTTTTAGGGCAAATGGAGGATGAC
ACAAATGAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS10710 [old locus tag: SAUSA300_1952 ]
- symbol: SAUSA300_RS10710
- description: hypothetical protein
- length: 123
- theoretical pI: 5.43795
- theoretical MW: 15018
- GRAVY: -0.956911
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAUSA300_1952
- PFAM: no clan defined Myosin_tail_1; Myosin tail (PF01576; HMM-score: 18.1)Cep57_CLD_2; Centrosome localisation domain of PPC89 (PF14197; HMM-score: 15.9)Phage_GP20; Phage minor structural protein GP20 (PF06810; HMM-score: 15.5)TPR_MLP1_2; TPR/MLP1/MLP2-like protein (PF07926; HMM-score: 14.6)and 4 moreTMF_TATA_bd; TATA element modulatory factor 1 TATA binding (PF12325; HMM-score: 14)NYD-SP28_assoc; Sperm tail C-terminal domain (PF14775; HMM-score: 13.8)Cortex-I_coil; Cortexillin I, coiled coil (PF09304; HMM-score: 13)FtsL (CL0225) DivIC; Septum formation initiator (PF04977; HMM-score: 11)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.006334
- TAT(Tat/SPI): 0.000998
- LIPO(Sec/SPII): 0.002299
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: 486200482 NCBI
- RefSeq: WP_001549172 NCBI
- UniProt: see SAUSA300_1952
⊟Protein sequence[edit | edit source]
- MKVNYETGFQIGVMEARLKKMRKQRDEYKKQRDELIGDIAKLRERNEELENMWRTLKNELFGRYEFYRFRLSELQIESRANKEVAIYRRAEINLSVILCRMDKLDGTNEFYEFLGQMEDDTNE
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.