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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006364000
- symbol?: arcA
- synonym:
- description?: arginine deiminase
- strand?: -
- coordinates?: 6398954..6400189
- synteny block?: BlockID0050730
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2574 (arcA)
08BA02176:
C248_2703 (arcA)
11819-97:
MS7_2640 (arcA)
6850:
RSAU_002478 (adi)
71193:
ST398NM01_2685
ECT-R 2:
ECTR2_2489 (arcA)
ED133:
SAOV_2684c
ED98:
SAAV_2704 (arcA)
HO 5096 0412:
SAEMRSA15_25400 (arcA)
JH1:
SaurJH1_2715
JH9:
SaurJH9_2659
JKD6008:
SAA6008_02694 (arcA)
JKD6159:
SAA6159_02531 (arcA)
LGA251:
SARLGA251_24070 (arcA)
M013:
M013TW_2616
MRSA252:
SAR2714 (arcA)
MSHR1132:
SAMSHR1132_24590
MSSA476:
SAS2521
Mu3:
SAHV_2619 (arcA)
Mu50:
SAV2635 (arcA)
MW2:
MW2556 (arcA)
RF122:
SAB2510c (arcA)
ST398:
SAPIG2685 (arcA)
T0131:
SAT0131_02901
TCH60:
HMPREF0772_10553 (arcA)
TW20:
SATW20_27730 (arcA)
USA300_TCH1516:
USA300HOU_2635 (arcA3)
VC40:
SAVC_12055
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVL
N315 MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVL
NCTC8325 MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVL
Newman MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVL
USA300_FPR3757 MTDGPIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVL
************************************************************
COL REEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGHEEEIKALFATLSNQELVD
N315 REEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGHEEEIKTLFATLSNQELVD
NCTC8325 REEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGHEEEIKALFATLSNQELVD
Newman REEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGHEEEIKALFATLSNQELVD
USA300_FPR3757 REEGVEVLYLEKLAAESIENPQVRSEFIDDVLAESKKTILGHEEEIKALFATLSNQELVD
***********************************************:************
COL KIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRAR
N315 KIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRAR
NCTC8325 KIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRAR
Newman KIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRAR
USA300_FPR3757 KIMSGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRAR
************************************************************
COL RRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKDVLAIGVSERTSAQAI
N315 RRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKDVLAIGVSERTSAQAI
NCTC8325 RRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKDVLAIGVSERTSAQAI
Newman RRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKDVLAIGVSERTSAQAI
USA300_FPR3757 RRESIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKDVLAIGVSERTSAQAI
************************************************************
COL EKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTMHSAILKAEGNMNIF
N315 EKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTMHSAILKAEGNMNIF
NCTC8325 EKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTMHSAILKAEGNMNIF
Newman EKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTMHSAILKAEGNMNIF
USA300_FPR3757 EKLARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTMHSAILKAEGNMNIF
************************************************************
COL IIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIR
N315 IIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIR
NCTC8325 IIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIR
Newman IIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIR
USA300_FPR3757 IIEYDDVNKDIAIKQSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIR
************************************************************
COL PGVVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI
N315 PGVVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI
NCTC8325 PGVVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI
Newman PGVVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI
USA300_FPR3757 PGVVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI
***************************************************