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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006362000
- symbol?: arcD
- synonym:
- description?: arginine-ornithine antiporter
- arginine-ornithine antiporter
- arginine/ornithine antiporter
- arginine/oirnithine antiporter
- arginine/oirnithine antiporter ArcD
- APC family amino acid-polyamine-organocation transporter
- APC family arginine/ornithine antiporter
- Arginine/ornithine antiporter ArcD
- arginine/ornithine APC family amino acid-polyamine-organocation transporter, antiporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6396384..6397814
- synteny block?: BlockID0050710
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2572 (arcD)
08BA02176:
C248_2701 (arcD)
11819-97:
MS7_2638 (arcD)
6850:
RSAU_002476 (arcD)
71193:
ST398NM01_2683
ECT-R 2:
ECTR2_2487
ED133:
SAOV_2682c
ED98:
SAAV_2702 (arcD)
HO 5096 0412:
SAEMRSA15_25380 (arcD)
JH1:
SaurJH1_2713
JH9:
SaurJH9_2657
JKD6008:
SAA6008_02692 (arcD)
JKD6159:
SAA6159_02529 (arcD)
LGA251:
SARLGA251_24050 (arcD)
M013:
M013TW_2614
MRSA252:
SAR2712 (arcD)
MSHR1132:
SAMSHR1132_24570
MSSA476:
SAS2519
Mu3:
SAHV_2617 (arcD)
Mu50:
SAV2633 (arcD)
MW2:
MW2554 (arcD)
RF122:
SAB2508c (arcD)
ST398:
SAPIG2683
T0131:
SAT0131_02899 (hipO)
TCH60:
HMPREF0772_10555 (arcD)
TW20:
SATW20_27710 (arcD)
USA300_TCH1516:
USA300HOU_2633 (arcD3)
VC40:
SAVC_12045
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNESGDNKLSKSSLIGLVIGSMIGGGAFNIMSDMGGKAGGLAIIIGWIITAIGMISLAFV
N315 MNESGDNKLSKSSLIGLVIGSMIGGGAFNIMSDMGGKAGGLAIIIGWIITAIGMISLAFV
NCTC8325 MNESGDNKLSKSSLIGLVIGSMIGGGAFNIMSDMGGKAGGLAIIIGWIITAIGMISLAFV
Newman MNESGDNKLSKSSLIGLVIGSMIGGGAFNIMSDMGGKAGGLAIIIGWIITAIGMISLAFV
USA300_FPR3757 MNESGDNKLSKSSLIGLVIGSMIGGGAFNIMSDMGGKAGGLAIIIGWIITAIGMISLAFV
************************************************************
COL FQNLTNERPELDGGIYSYAQAGFGDFVGFISAWGYWFSAFLGNVAYATLLMSAVGNFFPI
N315 FQNLTNERPELDGGIYSYAQAGFGDFVGFISAWGYWFSAFLGNVAYATLLMSAVGNFFPI
NCTC8325 FQNLTNERPELDGGIYSYAQAGFGDFVGFISAWGYWFSAFLGNVAYATLLMSAVGNFFPI
Newman FQNLTNERPELDGGIYSYAQAGFGDFVGFISAWGYWFSAFLGNVAYATLLMSAVGNFFPI
USA300_FPR3757 FQNLTNERPELDGGIYSYAQAGFGDFVGFISAWGYWFSAFLGNVAYATLLMSAVGNFFPI
************************************************************
COL FKGGNTLPSVIVASLLLWGVHFLILKGVETAAFINSIVTVAKLIPILLVIICMIIAFNFD
N315 FKGGNTLPSIIVASLLLWGVHFLILKGVETAAFINSIVTVAKLIPILLVIICMIIAFNFD
NCTC8325 FKGGNTLPSVIVASLLLWGVHFLILKGVETAAFINSIVTVAKLIPILLVIICMIIAFNFD
Newman FKGGNTLPSVIVASLLLWGVHFLILKGVETAAFINSIVTVAKLIPILLVIICMIIAFNFD
USA300_FPR3757 FKGGNTLPSVIVASLLLWGVHFLILKGVETAAFINSIVTVAKLIPILLVIICMIIAFNFD
*********:**************************************************
COL TFKTGFFSMTSEGVLPFSWASTMSQVKSTMLVTVWVFIGIEGAVIFSSRAKNKKDVGSAT
N315 TFKTGFFGMTSEGVLPFSWASTMSQVKSTMLVTVWVFIGIEGAVIFSSRAKNKKDVGSAT
NCTC8325 TFKTGFFSMTSEGVLPFSWASTMSQVKSTMLVTVWVFIGIEGAVIFSSRAKNKKDVGSAT
Newman TFKTGFFSMTSEGVLPFSWASTMSQVKSTMLVTVWVFIGIEGAVIFSSRAKNKKDVGSAT
USA300_FPR3757 TFKTGFFSMTSEGVLPFSWASTMSQVKSTMLVTVWVFIGIEGAVIFSSRAKNKKDVGSAT
*******.****************************************************
COL VIGLISVLIIYFLLTVLAQGVILQNHISQLDSPSMAQVLATIVGGWGSTLVNIGLIISVL
N315 VIGLISVLIIYFLLTVLAQGVILQNHISQLDSPSMAQVLATIVGGWGSTLVNIGLIISVL
NCTC8325 VIGLISVLIIYFLLTVLAQGVILQNHISQLDSPSMAQVLATIVGGWGSTLVNIGLIISVL
Newman VIGLISVLIIYFLLTVLAQGVILQNHISQLDSPSMAQVLATIVGGWGSTLVNIGLIISVL
USA300_FPR3757 VIGLISVLIIYFLLTVLAQGVILQNHISQLDSPSMAQVLATIVGGWGSTLVNIGLIISVL
************************************************************
COL GAWLGWTLLAGELPFIVAKDGLFPKWFAKENKNGAPVNALLITNILVQLFLISMLFTQSA
N315 GAWLGWTLLAGELPFIVAKDGLFPKWFAKENKNGAPVNALLITNILVQLFLISMLFTQSA
NCTC8325 GAWLGWTLLAGELPFIVAKDGLFPKWFAKENKNGAPVNALLITNILVQLFLISMLFTQSA
Newman GAWLGWTLLAGELPFIVAKDGLFPKWFAKENKNGAPVNALLITNILVQLFLISMLFTQSA
USA300_FPR3757 GAWLGWTLLAGELPFIVAKDGLFPKWFAKENKNGAPVNALLITNILVQLFLISMLFTQSA
************************************************************
COL YQFAFSLASSAILYPYMFSAFYQVKYTLEHRQQATTKQWTIGIIASIYAIWLIYAAGINY
N315 YQFAFSLASSAILYPYMFSAFYQVKYTLEHRQQATTKQWTIGIIASIYAIWLIYAAGINY
NCTC8325 YQFAFSLASSAILYPYMFSAFYQVKYTLEHRQQATTKQWTIGIIASIYAIWLIYAAGINY
Newman YQFAFSLASSAILYPYMFSAFYQVKYTLEHRQQATTKQWTIGIIASIYAIWLIYAAGINY
USA300_FPR3757 YQFAFSLASSAILYPYMFSAFYQVKYTLEHRQQATTKQWTIGIIASIYAIWLIYAAGINY
************************************************************
COL LLLTMLLYIPALLVYTIVQKNNQTRLIKSDYILFMIIIVLAVIGLIKLLMGTINVF
N315 LLLTMLLYIPALLVYSIVQKNNQTRLIKSDYILFMIIIVLAVIGLIKLLMGTINVF
NCTC8325 LLLTMLLYIPALLVYTIVQKNNQTRLIKSDYILFMIIIVLAVIGLIKLLMGTINVF
Newman LLLTMLLYIPALLVYTIVQKNNQTRLIKSDYILFMIIIVLAVIGLIKLLMGTINVF
USA300_FPR3757 LLLTMLLYIPALLVYTIVQKNNQTRLIKSDYILFMIIIVLAVIGLIKLLMGTINVF
***************:****************************************