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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006301000
- symbol?: —
- synonym:
- description?: 4-aminobutyrate aminotransferase
- 4-aminobutyrate aminotransferase
- aspartate aminotransferase family protein
- 4-aminobutyrate aminotransferase, putative
- 4-aminobutyrate transaminase
- Aminotransferase
- aminotransferase class-III family protein
- pseudogene
- putative aminotransferase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6348163..6349500
- synteny block?: BlockID0050170
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2542
08BA02176:
C248_2663
11819-97:
MS7_2609
6850:
RSAU_002445
71193:
ST398NM01_2652
ECT-R 2:
ECTR2_2458
ED133:
SAOV_2648c
ED98:
SAAV_2670
HO 5096 0412:
SAEMRSA15_25080
JH1:
SaurJH1_2680
JH9:
SaurJH9_2626
JKD6008:
SAA6008_02661
JKD6159:
SAA6159_02500
LGA251:
SARLGA251_23770
M013:
M013TW_2582
MRSA252:
SAR2682
MSHR1132:
SAMSHR1132_24190
MSSA476:
SAS2489
Mu3:
SAHV_2588
Mu50:
SAV2604
MW2:
MW2523
RF122:
SAB2477c
ST398:
SAPIG2652
T0131:
SAT0131_02836
TCH60:
HMPREF0772_10588 (gabT)
TW20:
SATW20_27430
USA300_TCH1516:
USA300HOU_2596
VC40:
SAVC_11890
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ------------MSKAHQLIQEDEHYFAKSGRIKYYPLVIDHGYGATLVDIEGKTYIDLL
N315 MHINTVNGRGMYMSKAHQLIQEDEHYFAKSGRIKYYPLVIDHGYGATLVDIEGKTYIDLL
NCTC8325 ------------MSKAHQLIQEDEHYFAKSGRIKYYPLVIDHGYGATLVDIEGKTYIDLL
Newman MHINTVNGRGMYMSKAHQLIQEDEHYFAKSGRIKYYPLVIDHGYGATLVDIEGKTYIDLL
USA300_FPR3757 MHINTVNGRGMYMSKAHQLIQEDEHYFAKSGRIKYYPLVIDHGYGATLVDIEGKTYIDLL
************************************************
COL SSASSQNVGHAPREVTEAIKAQVDKFIHYTPAYMYHEPLVRLAKKLCEIAPGDFEKRVTF
N315 SSASSQNVGHAPREVTEAIKAQVDKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTF
NCTC8325 SSASSQNVGHAPREVTEAIKAQVDKFIHYTPAYMYHEPLVRLAKKLCEIAPGDFEKRVTF
Newman SSASSQNVGHAPREVTEAIKAQVDKFIHYTPAYMYHEPLVRLAKKLCEIAPGDFEKRVTF
USA300_FPR3757 SSASSQNVGHAPREVTEAIKAQVDKFIHYTPAYMYHEPLVRLAKKLCEIAPGDFEKRVTF
************************************************:***********
COL GLTGSDANDGIIKFARAYTGRPYIISFTNAYHGSTFGSLSMSAISLNMRKHYGPLLNGFY
N315 GLTGSDANDGIIKFARAYTGRPYIISFTNAYHGSTFGSLSMSAISLNMRKHYGPLLNGFY
NCTC8325 GLTGSDANDGIIKFARAYTGRPYIISFTNAYHGSTFGSLSMSAISLNMRKHYGPLLNGFY
Newman GLTGSDANDGIIKFARAYTGRPYIISFTNAYHGSTFGSLSMSAISLNMRKHYGPLLNGFY
USA300_FPR3757 GLTGSDANDGIIKFARAYTGRPYIISFTNAYHGSTFGSLSMSAISLNMRKHYGPLLNGFY
************************************************************
COL HIPFPDKYRGMYEQPQANSVEEYLAPLKEMFAKYVPADEVACIVIETIQGDGGLLEPVPG
N315 HIPFPDKYRGMYEQPQANSVEEYLAPLKEMFAKYVPADEVACIVIETIQGDGGLLEPVPG
NCTC8325 HIPFPDKYRGMYEQPQANSVEEYLAPLKEMFAKYVPADEVACIVIETIQGDGGLLEPVPG
Newman HIPFPDKYRGMYEQPQANSVEEYLAPLKEMFAKYVPADEVACIVIETIQGDGGLLEPVPG
USA300_FPR3757 HIPFPDKYRGMYEQPQANSVEEYLAPLKEMFAKYVPADEVACIVIETIQGDGGLLEPVPG
************************************************************
COL YFEALEKICREHGILIAVDDIQQGFGRTGTWSSVSHFNFTPDLITFGKSLAGGMPMSAIV
N315 YFEALEKICREHGILIAVDDIQQGFGRTGTWSSVSHFNFTPDLITFGKSLAGGMPMSAIV
NCTC8325 YFEALEKICREHGILIAVDDIQQGFGRTGTWSSVSHFNFTPDLITFGKSLAGGMPMSAIV
Newman YFEALEKICREHGILIAVDDIQQGFGRTGTWSSVSHFNFTPDLITFGKSLAGGMPMSAIV
USA300_FPR3757 YFEALEKICREHGILIAVDDIQQGFGRTGTWSSVSHFNFTPDLITFGKSLAGGMPMSAIV
************************************************************
COL GRKEIMNCLEAPAHLFTTGANPVSCEAALATIQMIEDQSLLQASAEKGEYVRKRMDQWVS
N315 GRKEIMNCLEAPAHLFTTGANPVSCEAALATIQMIEDQSLLQASAEKGEYVRKRMDQWVS
NCTC8325 GRKEIMNCLEAPAHLFTTGANPVSCEAALATIQMIEDQSLLQASAEKGEYVRKRMDQWVS
Newman GRKEIMNCLEAPAHLFTTGANPVSCEAALATIQMIEDQSLLQASAEKGEYVRKRMDQWVS
USA300_FPR3757 GRKEIMNCLEAPAHLFTTGANPVSCEAALATIQMIEDQSLLQASAEKGEYVRKRMDQWVS
************************************************************
COL KYNSVGDVRGKGLSIGIDIVSDKKLKTRDASAALKICNYCFEHGVVIIAVAGNVLRFQPP
N315 KYNSVGDVRGKGLSIGIDIVSDKKLKTRDASAALKICNYCFEHGVVIIAVAGNVLRFQPP
NCTC8325 KYNSVGDVRGKGLSIGIDIVSDKKLKTRDASAALKICNYCFEHGVVIIAVAGNVLRFQPP
Newman KYNSVGDVRGKGLSIGIDIVSDKKLKTRDASAALKICNYCFEHGVVIIAVAGNVLRFQPP
USA300_FPR3757 KYNSVGDVRGKGLSIGIDIVSDKKLKTRDASAALKICNYCFEHGVVIIAVAGNVLRFQPP
************************************************************
COL LVITYEQLDTALNTIEDALTALEAGNLDQYDISGQGW
N315 LVITYEQLDTALNTIEDALTALEAGNLDQYDISGQGW
NCTC8325 LVITYEQLDTALNTIEDALTALEAGNLDQYDISGQGW
Newman LVITYEQLDTALNTIEDALTALEAGNLDQYDISGQGW
USA300_FPR3757 LVITYEQLDTALNTIEDALTALEAGNLDQYDISGQGW
*************************************