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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006259000
- symbol?: —
- synonym:
- description?: GTP-binding protein
- GTP-binding protein
- cobalamin synthesis protein
- cobalamin synthesis-related protein CobW
- putative cobalamin synthesis protein
- cobalamin synthesis protein/P47K family protein
- cobalamin (vitamin B12) biosynthesis protein
- cobalamin synthesis-like protein CobW
- cobalamin synthesis protein, P47K
- cobalamin synthesis protein, putative
- cobalamin synthesis protein P47K
- cobalamin synthesis related protein, CobW
- cobalmin synthesis protein
- cobW/HypB/UreG, nucleotide-binding domain protein
- Low-affinity zinc transport protein
- Putative GTPases (G3E family)
- putative metal chaperone, GTPase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6314221..6315111
- synteny block?: BlockID0049820
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2520 (cobW)
08BA02176:
C248_2641
11819-97:
MS7_2588
6850:
RSAU_002423 (cobW)
71193:
ST398NM01_2632
ECT-R 2:
ECTR2_2436
ED133:
SAOV_2627c
ED98:
SAAV_2648
HO 5096 0412:
SAEMRSA15_24850
JH1:
SaurJH1_2658
JH9:
SaurJH9_2604
JKD6008:
SAA6008_02620
JKD6159:
SAA6159_02479
LGA251:
SARLGA251_23560
M013:
M013TW_2556
MRSA252:
SAR2662
MSHR1132:
SAMSHR1132_23970
MSSA476:
SAS2468
Mu3:
SAHV_2566
Mu50:
SAV2582
MW2:
MW2502
RF122:
SAB2456c
ST398:
SAPIG2632
T0131:
SAT0131_02794
TCH60:
HMPREF0772_10609
TW20:
SATW20_27030
USA300_TCH1516:
USA300HOU_2576 (cobW3)
VC40:
SAVC_11785
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKIVIIGGFLGGGKTTVLNHLLAESLKESLKPAVIMNEFGKMSVDGALVSEDIPLSELTE
N315 MKIVIIGGFLGGGKTTVLNHLLAESLKESLKPAVIMNEFGKMSVDGALVSEDIPLSELTE
NCTC8325 MKIVIIGGFLGGGKTTVLNHLLAESLKESLKPAVIMNEFGKMSVDGALVSEDIPLSELTE
Newman MKIVIIGGFLGGGKTTVLNHLLAESLKESLKPAVIMNEFGKMSVDGALVSEDIPLSELTE
USA300_FPR3757 MKIVIIGGFLGGGKTTVLNHLLAESLKESLKPAVIMNEFGKMSVDGALVSEDIPLSELTE
************************************************************
COL GCICCAMKADVSEQLHQLYLKEQPDIVFIECSGIAEPVSVLDACLTPILAPFTTITHMIG
N315 GCICCAMKADVSEQLHQLYLKEQPDIVFIECSGIAEPVSVLDACLTPILAPFTTITHMIG
NCTC8325 GCICCAMKADVSEQLHQLYLKEQPDIVFIECSGIAEPVSVLDACLTPILAPFTTITHMIG
Newman GCICCAMKADVSEQLHQLYLKEQPDIVFIECSGIAEPVSVLDACLTPILAPFTTITHMIG
USA300_FPR3757 GCICCAMKADVSEQLHQLYLKEQPDIVFIECSGIAEPVSVLDACLTPILAPFTTITHMIG
************************************************************
COL VIDASMYKHIKSFPKDIQGLFYEQLAYCSVLFVNKIDSADVETTSKLLKDLEVINPEADI
N315 VIDASMYKHIKSFPKDIQGLFYEQLAYCSVLFVNKIDSADVETTSKLLKDLEVINPEADI
NCTC8325 VIDASMYKHIKSFPKDIQGLFYEQLAYCSVLFVNKIDSADVETTSKLLKDLEVINPEADI
Newman VIDASMYKHIKSFPKDIQGLFYEQLAYCSVLFVNKIDSADVETTSKLLKDLEVINPEADI
USA300_FPR3757 VIDASMYKHIKSFPKDIQGLFYEQLAYCSVLFVNKIDSADVETTSKLLKDLEVINPEADI
************************************************************
COL QVGMHGSVTLPISVRQMTATSDNKHKSLHQMINHQFVQSPVKCTKAEFIKRLACLPSHIY
N315 QVGMHGSVTLPISVRQMTATSDNKHESLHKTINHQFVQSPVTCTKAEFIKRLACLPSHIY
NCTC8325 QVGMHGSVTLPISVRQMTATSDNKHKSLHQMINHQFVQSPVKCTKAEFIKRLACLPSHIY
Newman QVGMHGSVTLPISVRQMTATSDNKHKSLHQMINHQFVQSPVKCTKAEFIKRLACLPSHIY
USA300_FPR3757 QVGMHGSVTLPISVRQMTATSDNKHKSLHQMINHQFVQSPVKCTKAEFIKRLACLPSHIY
*************************:***: **********.******************
COL RLKGFMTFEDTAHTYLIQFTQGQYELTPVAFSKKVPEYLVLIGKGISKEDYQCLEQ
N315 RLKGFMTFEDTTHTYLIQFTQGQYELTPVAFSKKVPEYLVLIGKGISKEDYQCLEQ
NCTC8325 RLKGFMTFEDTAHTYLIQFTQGQYELTPVAFSKKVPEYLVLIGKGISKEDYQCLEQ
Newman RLKGFMTFEDTAHTYLIQFTQGQYELTPVAFSKKVPEYLVLIGKGISKEDYQCLEQ
USA300_FPR3757 RLKGFMTFEDTAHTYLIQFTQGQYELTPVAFSKKVPEYLVLIGKGISKEDYQCLEQ
***********:********************************************