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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006223000
- symbol?: —
- synonym:
- description?: D-lactate dehydrogenase
- D-lactate dehydrogenase
- lactate dehydrogenase
- D-lactate dehydrogenase, putative
- D-isomer specific 2-hydroxyacid dehydrogenase
- D-isomer specific 2-hydroxyacid dehydrogenase family protein
- D-lactate dehydrogenase (D-LDH) (D-specific D-2-hydroxyacid dehydrogenase)
- D-specific D-2-hydroxyacid dehydrogenase ddh
- D-specific D-2-hydroxyacid dehydrogenase ddh-like protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6285810..6286808
- synteny block?: BlockID0049470
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2496 (ddh)
08BA02176:
C248_2617
11819-97:
MS7_2566
6850:
RSAU_002400
71193:
ST398NM01_2610
ECT-R 2:
ECTR2_2412
ED133:
SAOV_2604c
ED98:
SAAV_2625
HO 5096 0412:
SAEMRSA15_24620
JH1:
SaurJH1_2635
JH9:
SaurJH9_2581
JKD6008:
SAA6008_02598
JKD6159:
SAA6159_02455
LGA251:
SARLGA251_23340
M013:
M013TW_2533
MRSA252:
SAR2640
MSHR1132:
SAMSHR1132_23800
MSSA476:
SAS2445
Mu3:
SAHV_2543
Mu50:
SAV2559
MW2:
MW2480
RF122:
SAB2432c
ST398:
SAPIG2610
T0131:
SAT0131_02770
TCH60:
HMPREF0772_10630 (ldhD)
TW20:
SATW20_26810
USA300_TCH1516:
USA300HOU_2554
VC40:
SAVC_11675
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVAGYDGLSLSQQIPLSEH
N315 MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVAGYDGLSLSQQIPLSEH
NCTC8325 MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVAGYDGLSLSQQIPLSEH
Newman MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVAGYDGLSLSQQIPLSEH
USA300_FPR3757 MTKIKIMSVRDEDMPYIKAWAEKHHVEVDITKEALTDDNVEGVAGYDGLSLSQQIPLSEH
************************************************************
COL VYKRLNELGIKQIAQRSAGFDTYDLELANKYNFIVSNVPSYSPNSIAEFAVNQAINVVRH
N315 VYKRLNELGIKQIAQRSAGFDTYDLELANKYNLIVSNVPSYSPNSIAEFAVNQAINVVRH
NCTC8325 VYKRLNELGIKQIAQRSAGFDTYDLELANKYNFIVSNVPSYSPNSIAEFAVNQAINVVRH
Newman VYKRLNELGIKQIAQRSAGFDTYDLELANKYNFIVSNVPSYSPNSIAEFAVNQAINVVRH
USA300_FPR3757 VYKRLNELGIKQIAQRSAGFDTYDLELANKYNFIVSNVPSYSPNSIAEFAVNQAINVVRH
********************************:***************************
COL FNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRVVADIFANGYQSDVVAYDPFP
N315 FNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRVVADIFANGYQSDVVAYDPFP
NCTC8325 FNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRVVADIFANGYQSDVVAYDPFP
Newman FNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRVVADIFANGYQSDVVAYDPFP
USA300_FPR3757 FNQIQTKVREHDFRWEPTILSKSIKDLKVAVIGTGRIGRVVADIFANGYQSDVVAYDPFP
************************************************************
COL NAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLFNAELFKHFKKGAVFVNCARGSL
N315 NAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLFNAELFKHFKKGAVFVNCARGSL
NCTC8325 NAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLFNAELFKHFKKGAVFVNCARGSL
Newman NAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLFNAELFKHFKKGAVFVNCARGSL
USA300_FPR3757 NAKIATYVDYKDTIEEAVEGADIVTLHVPATKYNHYLFNAELFKHFKKGAVFVNCARGSL
************************************************************
COL VDTKALLDALDNGVIKGAALDTYEFERKLFPSDQRGKTLNDPLLESLIDREDVILTPHIA
N315 VDTKALLDALDNGVIKGAALDTYEFERKLFPSDQRGKTPNDPLLESLIDREDVILTPHIA
NCTC8325 VDTKALLDALDNGVIKGAALDTYEFERKLFPSDQRGKTLNDPLLESLIDREDVILTPHIA
Newman VDTKALLDALDNGVIKGAALDTYEFERKLFPSDQRGKTLNDPLLESLIDREDVILTPHIA
USA300_FPR3757 VDTKALLDALDNGVIKGAALDTYEFERKLFPSDQRGKTLNDPLLESLIDREDVILTPHIA
************************************** *********************
COL FYTEAAVKNLIVDALDATLDVLQTGDTRLRVN
N315 FYTEAAVKNLIVDALDATLDVLQTGDTRLRVN
NCTC8325 FYTEAAVKNLIVDALDATLDVLQTGDTRLRVN
Newman FYTEAAVKNLIVDALDATLDVLQTGDTRLRVN
USA300_FPR3757 FYTEAAVKNLIVDALDATLDVLQTGDTRLRVN
********************************