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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006150000
- symbol?: —
- synonym:
- description?: lantibiotic ABC transporter ATP-binding protein
- lantibiotic ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- ABC superfamily ATP binding cassette transporter, ABC protein
- ABC transporter
- ABC transporter, ATP-binding protein
- ABC transporter family protein
- Lantibiotic transport ATP-binding protein
- transporter
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6222379..6223149
- synteny block?: BlockID0048800
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2450
08BA02176:
C248_2571
11819-97:
MS7_2519
6850:
—
71193:
ST398NM01_2566
ECT-R 2:
ECTR2_2366
ED133:
SAOV_2558
ED98:
SAAV_2579
HO 5096 0412:
SAEMRSA15_24120
JH1:
SaurJH1_2589
JH9:
SaurJH9_2537
JKD6008:
SAA6008_02551
JKD6159:
SAA6159_02410
LGA251:
SARLGA251_22890
M013:
M013TW_2479
MRSA252:
SAR2594
MSHR1132:
SAMSHR1132_23350
MSSA476:
SAS2399
Mu3:
SAHV_2498
Mu50:
SAV2514
MW2:
MW2433
RF122:
SAB2388
ST398:
SAPIG2566
T0131:
SAT0131_02716 (azi)
TCH60:
HMPREF0772_10680
TW20:
SATW20_26350
USA300_TCH1516:
USA300HOU_2503
VC40:
SAVC_11445
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDVLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTTLMKVILGYSSFQSGNF
N315 MGVLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTTLMKVILGYSSFQSGNF
NCTC8325 MDVLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTTLMKVILGYSSFQSGNF
Newman MDVLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTTLMKVILGYSSFQSGNF
USA300_FPR3757 MDVLTIEHLTKKIGNKTILEDVSFKLKRGQIVGLVGANGAGKTTLMKVILGYSSFQSGNF
*.**********************************************************
COL NVINSKDSKSNIGALIENPGIYPFMSGYENLKLLNESKNTQDIDKIVSQLHMDEYIHKKA
N315 NVINSKDSKSNIGALIENPGIYPFMSGYENLKLLNESKNTQDIDKIVSQLHMDEYIHKKA
NCTC8325 NVINSKDSKSNIGALIENPGIYPFMSGYENLKLLNESKNTQDIDKIVSQLHMDEYIHKKA
Newman NVINSKDSKSNIGALIENPGIYPFMSGYENLKLLNESKNTQDIDKIVSQLHMDEYIHKKA
USA300_FPR3757 NVINSKDSKSNIGALIENPGIYPFMSGYENLKLLNESKNTQDIDKIVSQLHMDEYIHKKA
************************************************************
COL KTYSLGMKQKLGIAIAFLNKPQFIILDEPMNGLDPKAVRDVRELIVQKAQEGVTFLISSH
N315 KTYSLGMKQKLGIAIAFLNEPQFIILDEPMNGLDPKAVRDVRELIVQKSQEGVTFLISSH
NCTC8325 KTYSLGMKQKLGIAIAFLNKPQFIILDEPMNGLDPKAVRDVRELIVQKAQEGVTFLISSH
Newman KTYSLGMKQKLGIAIAFLNKPQFIILDEPMNGLDPKAVRDVRELIVQKAQEGVTFLISSH
USA300_FPR3757 KTYSLGMKQKLGIAIAFLNKPQFIILDEPMNGLDPKAVRDVRELIVQKAQEGVTFLISSH
*******************:****************************:***********
COL ILSELVKITNSILIINKGKIVTETSEEELKQFKDNDLENVLLEIIEREDQA
N315 ILSELVKITNSILIINKGKIVTETSEEELKQFKDNDLENVLLEIIEREDQA
NCTC8325 ILSELVKITNSILIINKGKIVTETSEEELKQFKDNDLENVLLEIIEREDQA
Newman ILSELVKITNSILIINKGKIVTETSEEELKQFKDNDLENVLLEIIEREDQA
USA300_FPR3757 ILSELVKITNSILIINKGKIVTETSEEELKQFKDNDLENVLLEIIEREDQA
***************************************************