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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006000000
- symbol?: opuCA
- synonym:
- description?: glycine/betaine ABC transporter ATP-binding protein
- glycine/betaine ABC transporter ATP-binding protein
- amino acid ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- glycine betaine/carnitine/choline ABC transporter, ATP-binding protein, putative
- glycine betaine/carnitine/choline ABC transporter ATP-binding protein
- glycine betaine/carnitine/choline ABC transporter opuCA
- glycine betaine/L-proline transport ATP-binding subunit
- OsmotiCALL import_20_25_26_pangenomey activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA
- putative glycine betaine/carnitine/cholinetransport ATP-binding protein
- betaine-carnitine-choline ABC transporter
- glycine betaine/carnitine/choline ABC transporter
- glycine betaine/carnitine/choline transport ATP-binding protein opuCA
- glycine betaine/choline ABC superfamily ATP binding cassette transporter, ABC protein
- glycine betaine/choline ABC transporter ATP-binding protein
- glycine betaine/L-proline ABC transporter ATPase
- glycine betaine/L-proline ABC transporter ATP-binding protein
- glycine betaine/L-proline transporter ATP-binding subunit
- glycine betaine transport ATP-binding protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6061557..6062789
- synteny block?: BlockID0047440
- occurrence?: in 100% of 33 strains
opuCA: carnitine-specific compatible solute ABC transporter ATP-binding subunit [1]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2385 (opuCA)
08BA02176:
C248_2498 (opuCA)
11819-97:
MS7_2462 (proV)
6850:
RSAU_002288 (opuCA)
71193:
ST398NM01_2500
ECT-R 2:
ECTR2_2306 (proV)
ED133:
SAOV_2498c
ED98:
SAAV_2514
HO 5096 0412:
SAEMRSA15_23480 (opuCA)
JH1:
SaurJH1_2523
JH9:
SaurJH9_2475
JKD6008:
SAA6008_02490 (opuCA)
JKD6159:
SAA6159_02346 (opuCA)
LGA251:
SARLGA251_22290 (opuCA)
M013:
M013TW_2411
MRSA252:
SAR2538 (opuCA)
MSHR1132:
SAMSHR1132_22760
MSSA476:
SAS2340
Mu3:
SAHV_2432 (opuCA)
Mu50:
SAV2448 (opuCA)
MW2:
MW2372 (opuCA)
RF122:
SAB2330c (opuCA)
ST398:
SAPIG2500
T0131:
SAT0131_02647 (ffh)
TCH60:
HMPREF0772_10740 (opuCA)
TW20:
SATW20_25770 (opuCA)
USA300_TCH1516:
USA300HOU_2437
VC40:
SAVC_11115
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --MLSIKHLTKIYSGNKKAVDDISLDIQSGEFIAFIGTSGSGKTTALRMINRMIEATEGQ
N315 MIMLSIKHLTKIYSGNKKAVDDISLDIQSGEFIAFIGTSGSGKTTALRMINRMIEATEGQ
NCTC8325 --MLSIKHLTKIYSGNKKAVDDISLDIQSGEFIAFIGTSGSGKTTALRMINRMIEATEGQ
Newman --MLSIKHLTKIYSGNKKAVDDISLDIQSGEFIAFIGTSGSGKTTALRMINRMIEATEGQ
USA300_FPR3757 --MLSIKHLTKIYSGNKKAVDDISLDIQSGEFIAFIGTSGSGKTTALRMINRMIEATEGQ
**********************************************************
COL IEIDGKDVRSMNPVELRRNIGYVIQQIGLMPHMTIKENIVLVPKLLKWTKEEKDKRAKEL
N315 IEIDGKDVRSMNPVELRRNIGYVIQQIGLMPHMTIKENIVLVPKLLKWTKEEKDKRAKEL
NCTC8325 IEIDGKDVRSMNPVELRRNIGYVIQQIGLMPHMTIKENIVLVPKLLKWTKEEKDKRAKEL
Newman IEIDGKDVRSMNPVELRRNIGYVIQQIGLMPHMTIKENIVLVPKLLKWTKEEKDKRAKEL
USA300_FPR3757 IEIDGKDVRSMNPVELRRNIGYVIQQIGLMPHMTIKENIVLVPKLLKWTKEEKDKRAKEL
************************************************************
COL IKLVDLPESFLERYPAELSGGQQQRIGVVRALAAEQDIILMDEPFGALDPITRDTLQDLV
N315 IKLVDLPESFLERYPAELSGGQQQRIGVVRALAAEQDIILMDEPFGALDPITRDTLQDLV
NCTC8325 IKLVDLPESFLERYPAELSGGQQQRIGVVRALAAEQDIILMDEPFGALDPITRDTLQDLV
Newman IKLVDLPESFLERYPAELSGGQQQRIGVVRALAAEQDIILMDEPFGALDPITRDTLQDLV
USA300_FPR3757 IKLVDLPESFLERYPAEISGGQQQRIGVVRALAAEQDIILMDEPFGALDPITRDTLQDLV
*****************:******************************************
COL KTLQRKLGKTFIFVTHDMDEAIKLADKICIMSEGKVVQFDTPDNILRHPANDFVRDFIGQ
N315 KTLQRKLGKTFIFVTHDMDEAIKLADKICIMSEGKVVQFDTPDNILRHPANDFVRDFIGQ
NCTC8325 KTLQRKLGKTFIFVTHDMDEAIKLADKICIMSEGKVVQFDTPDNILRHPANDFVRDFIGQ
Newman KTLQRKLGKTFIFVTHDMDEAIKLADKICIMSEGKVVQFDTPDNILRHPANDFVRDFIGQ
USA300_FPR3757 KTLQRKLGKTFIFVTHDMDEAIKLADKICIMSEGKVVQFDTPDNILRHPANDFVRDFIGQ
************************************************************
COL NRLIQDRPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIE
N315 NRLIQDRPNDKTVEGVMIKPITIQADATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIE
NCTC8325 NRLIQDRPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIE
Newman NRLIQDRPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIE
USA300_FPR3757 NRLIQDRPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIE
*************************:****************:*****************
COL DINQGIRGHKSLRDTMQQHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLITRA
N315 DINQGIRGHKSLRDTMQQHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDKQRLVGLITRA
NCTC8325 DINQGIRGHKSLRDTMQQHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLITRA
Newman DINQGIRGHKSLRDTMQQHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLITRA
USA300_FPR3757 DINQGIRGHKSLRDTMQQHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLITRA
*************************************************:**********
COL NVVDIVYDTIWGDSEDTVQTEHVGEDTASSKVHEQHTTNVKVRDIGDDKS
N315 NVVDIVYDTIWGDSEDAVQTEHVGEDTVSSKMHEQHTTNVKVRDIGDDKS
NCTC8325 NVVDIVYDTIWGDSEDTVQTEHVGEDTASSKVHEQHTTNVKVRDIGDDKS
Newman NVVDIVYDTIWGDSEDTVQTEHVGEDTASSKVHEQHTTNVKVRDIGDDKS
USA300_FPR3757 NVVDIVYDTIWGDSEDTVQTEHVGEDTASSKVHEQHTTNVKVRDIGDDKS
****************:**********.***:******************
- ↑ Christopher F Schuster, Lauren E Bellows, Tommaso Tosi, Ivan Campeotto, Rebecca M Corrigan, Paul Freemont, Angelika Gründling
The second messenger c-di-AMP inhibits the osmolyte uptake system OpuC in Staphylococcus aureus.
Sci Signal: 2016, 9(441);ra81
[PubMed:27531650] [WorldCat.org] [DOI] (I e)