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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005996000
- symbol?: —
- synonym:
- description?: MFS transporter
- MFS transporter
- drug transporter
- integral membrane efflux protein
- major facilitator superfamily drug transporter, putative
- putative drug transporter
- drug transporter, putative
- major facilitator family transporter
- major facilitator superfamily protein
- major facilitator superfamily protein (MFS)
- major facilitator transporter
- MFS family major facilitator transporter
- multidrug resistance protein B
- putative transport protein
- quinolone resistance protein norB
- transmembrane efflux protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6057138..6058538
- synteny block?: BlockID0047400
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2381
08BA02176:
C248_2494
11819-97:
MS7_2458
6850:
RSAU_002284
71193:
ST398NM01_2496
ECT-R 2:
ECTR2_2302
ED133:
SAOV_2494c
ED98:
SAAV_2510
HO 5096 0412:
SAEMRSA15_23440
JH1:
SaurJH1_2519
JH9:
SaurJH9_2471
JKD6008:
SAA6008_02486
JKD6159:
SAA6159_02342
LGA251:
SARLGA251_22250
M013:
M013TW_2407
MRSA252:
SAR2534
MSHR1132:
SAMSHR1132_22720
MSSA476:
SAS2336
Mu3:
SAHV_2428
Mu50:
SAV2444
MW2:
MW2368
RF122:
SAB2326c
ST398:
SAPIG2496
T0131:
SAT0131_02643 (rnc)
TCH60:
HMPREF0772_10744
TW20:
SATW20_25730
USA300_TCH1516:
USA300HOU_2433
VC40:
SAVC_11095
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MDTSKQFRGDNRLLLGIVLGVITFWLFAQSLVNLVVPLQSTYSSDVGTINIAVSLSALFA
N315 MDTSKQFRGDNRLLLGIVLGVITFWLFAQSLVNLVVPLQSTYSSDVGTINIAVSLSALFA
NCTC8325 MDTSKQFRGDNRLLLGIVLGVITFWLFAQSLVNLVVPLQSTYSSDVGTINIAVSLSALFA
Newman MDTSKQFRGDNRLLLGIVLGVITFWLFAQSLVNLVVPLQSTYSSDVGTINIAVSLSALFA
USA300_FPR3757 MDTSKQFRGDNRLLLGIVLGVITFWLFAQSLVNLVVPLQSTYSSDVGTINIAVSLSALFA
************************************************************
COL GLFIVGAGDVADKFGRVKITYVGLILNVVGSLLIIITPLPAFLIIGRIIQGLSAACIMPS
N315 GLFIVGAGDVADKFGRVKITYVGLILNVVGSLLIIITPLPAFLIIGRIIQGLSAACIMPS
NCTC8325 GLFIVGAGDVADKFGRVKITYVGLILNVVGSLLIIITPLPAFLIIGRIIQGLSAACIMPS
Newman GLFIVGAGDVADKFGRVKITYVGLILNVVGSLLIIITPLPAFLIIGRIIQGLSAACIMPS
USA300_FPR3757 GLFIVGAGDVADKFGRVKITYVGLILNVVGSLLIIITPLPAFLIIGRIIQGLSAACIMPS
************************************************************
COL TLAIINEYYIGTRRQRALSYWSIGSWGGSGICTLFGGLMATYIGWRSIFVVSILLTLLAM
N315 TLAIINEYYIGTRRQRALSYWSIGSWGGSGICTLFGGLMATYIGWRSIFVVSILLTLLAM
NCTC8325 TLAIINEYYIGTRRQRALSYWSIGSWGGSGICTLFGGLMATYIGWRSIFVVSILLTLLAM
Newman TLAIINEYYIGTRRQRALSYWSIGSWGGSGICTLFGGLMATYIGWRSIFVVSILLTLLAM
USA300_FPR3757 TLAIINEYYIGTRRQRALSYWSIGSWGGSGICTLFGGLMATYIGWRSIFVVSILLTLLAM
************************************************************
COL YLIKHAPETKAEPIKGMKAEAKKFDVIGLVILVVTMLSLNVIITQTSHFGLVSPLILALI
N315 YLIKHAPETKAEPIKGMKAEAKKFDVIGLVILVVTMLSLNVIITQTSHFGLVSPLILGLI
NCTC8325 YLIKHAPETKAEPIKGMKAEAKKFDVIGLVILVVTMLSLNVIITQTSHFGLVSPLILGLI
Newman YLIKHAPETKAEPIKGMKAEAKKFDVIGLVILVVTMLSLNVIITQTSHFGLVSPLILALI
USA300_FPR3757 YLIKHAPETKAEPIKGMKAEAKKFDVIGLVILVVTMLSLNVIITQTSHFGLVSPLILGLI
*********************************************************.**
COL VVFICSLVGFVYYENKIKHPLVDFSIFKNRGYSGATISNFLLNGVAGGALIVINTYYQQQ
N315 VVFICSLVGFVYYENKIKHPLVDFSIFKNRGYSGATISNFLLNGVAGGALIVINTYYQQQ
NCTC8325 VVFICSLVGFVYYENKIKHPLVDFSIFKNRGYSGATISNFLLNGVAGGALIVINTYYQQQ
Newman VVFICSLVGFVYYENKIKHPLVDFSIFKNRGYSGATISNFLLNGVAGGALIVINTYYQQQ
USA300_FPR3757 VVFICSLVGFVYYENKIKHPLVDFSIFKNRGYSGATISNFLLNGVAGGALIVINTYYQQQ
************************************************************
COL LGFNSSQTGYISLTYLITVLSMIRVGEKILSQHGPKRPLLLGSGFTVIGLILLSLTFLPE
N315 LGFNSSQTGYISLTYLIAVLSMIRVGEKILSQHGPKRPLLLGSGFTVIGLILLSLTFLPE
NCTC8325 LGFNSSQTGYISLTYLITVLSMIRVGEKILSQHGPKRPLLLGSGFTVIGLILLSLTFLPE
Newman LGFNSSQTGYISLTYLITVLSMIRVGEKILSQHGPKRPLLLGSGFTVIGLILLSLTFLPE
USA300_FPR3757 LGFNSSQTGYISLTYLITVLSMIRVGEKILSQHGPKRPLLLGSGFTVIGLILLSLTFLPE
*****************:******************************************
COL VWYIISSIVGYLLFGTGLGLYATPSTDTAVASAPDDKSGVASGVYKMASSLGNAFGVAVS
N315 VWYIISSIVGYLLFGTGLGLYATPSTDTAVASAPDDKSGVASGVYKMASSLGNAFGVAVS
NCTC8325 VWYIISSIVGYLLFGTGLGLYATPSTDTAVASAPDDKSGVASGVYKMASSLGNAFGVAVS
Newman VWYIISSIVGYLLFGTGLGLYATPSTDTAVASAPDDKSGVASGVYKMASSLGNAFGVAVS
USA300_FPR3757 VWYIISSIVGYLLFGTGLGLYATPSTDTAVASAPDDKSGVASGVYKMASSLGNAFGVAVS
************************************************************
COL GTVYTVLAANLNLNLGGFTGMMFNALLAIVAFLVILLLVPKNQTNL
N315 GTVYTVLAANLNLNLGGFTGMMFNALLAIVAFLVILLLVPKNQTNL
NCTC8325 GTVYTVLAANLNLNLGGFTGMMFNALLAIVAFLVILLLVPKNQTNL
Newman GTVYTVLAANLNLNLGGFTGMMFNALLAIVAFLVILLLVPKNQTNL
USA300_FPR3757 GTVYTVLAANLNLNLGGFTGMMFNALLAIVAFLVILLLVPKNQTNL
**********************************************