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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005947000
- symbol?: tcyB
- synonym:
- description?: amino acid ABC transporter permease
- amino acid ABC transporter permease
- ABC transporter permease
- amino acid ABC transport permease, putative
- L-cystine transport system permease protein tcyB
- ABC superfamily ATP binding cassette transporter, membrane protein
- ABC transporter ATP-binding protein
- ABC transporter membrane-spanning permease -glutamine transport
- amino acid ABC transporter, permease protein
- polar amino acid ABC transporter inner membrane subunit
- transport system membrane protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6010972..6011466
- synteny block?: BlockID0046910
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2350
08BA02176:
C248_2458
11819-97:
MS7_2428 (tcyB)
6850:
RSAU_002251
71193:
ST398NM01_2464
ECT-R 2:
ECTR2_2272
ED133:
SAOV_2459c
ED98:
SAAV_2478
HO 5096 0412:
SAEMRSA15_23120
JH1:
SaurJH1_2486
JH9:
SaurJH9_2438
JKD6008:
SAA6008_02454
JKD6159:
SAA6159_02314
LGA251:
SARLGA251_21950
M013:
M013TW_2374
MRSA252:
SAR2503
MSHR1132:
SAMSHR1132_22410
MSSA476:
SAS2304
Mu3:
SAHV_2397
Mu50:
SAV2413
MW2:
MW2335
RF122:
SAB2293c
ST398:
SAPIG2464
T0131:
SAT0131_02604
TCH60:
HMPREF0772_10774 (tcyB)
TW20:
SATW20_25430
USA300_TCH1516:
USA300HOU_2394
VC40:
SAVC_10935
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVKMFLNLNSEQQHALDAAKQAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTS
N315 ------------------------------------------------------------
NCTC8325 ---MFLNLNSEQQHALDAAKQAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTS
Newman ---MFLNLNSEQQHALDAAKQAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTS
USA300_FPR3757 ---MFLNLNSEQQHALDAAKQAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTS
COL KILRSISRVYVSIIRGTPMIVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLN
N315 ------------------MIVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLN
NCTC8325 KILRSISRVYVSIIRGTPMIVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLN
Newman KILRSISRVYVSIIRGTPMIVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLN
USA300_FPR3757 KILRSISRVYVSIIRGTPMIVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLN
******************************************
COL VGAYASEIIRGGIISIPKGQTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIK
N315 VGAYASEIIRGGIISIPKGQTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIK
NCTC8325 VGAYASEIIRGGIISIPKGQTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIK
Newman VGAYASEIIRGGIISIPKGQTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIK
USA300_FPR3757 VGAYASEIIRGGIISIPKGQTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIK
************************************************************
COL DTSLLGFILVAEMFRKAQEVASTTYEYLTIYVLVALMYWVVCFIISIIQGIYESYIERGY
N315 DTSLLGFILVAEMFRKAQEVASTTYEYLTIYVLVALMYWVVCFIISIIQGIYESYIERGY
NCTC8325 DTSLLGFILVAEMFRKAQEVASTTYEYLTIYVLVALMYWVVCFIISIIQGIYESYIERGY
Newman DTSLLGFILVAEMFRKAQEVASTTYEYLTIYVLVALMYWVVCFIISIIQGIYESYIERGY
USA300_FPR3757 DTSLLGFILVAEMFRKAQEVASTTYEYLTIYVLVALMYWVVCFIISIIQGIYESYIERGY
************************************************************
COL RS
N315 RS
NCTC8325 RS
Newman RS
USA300_FPR3757 RS
**