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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005915000
- symbol?: narK
- synonym:
- description?: MFS transporter
- MFS transporter
- nitrite extrusion protein
- NarK/NasA family nitrate transporter
- nitrate transporter NarT
- nitrite extrusion protein, putative
- nitrite transport protein
- nitrite extrusion protein NarK
- major facilitator superfamily nitrate:nitrite antiporter
- major facilitator transporter
- MFS family major facilitator transporter, nitrate:nitrite antiporter
- Nitrate/nitrite transporter
- nitrite extrusion protein (Nitrite facilitator)
- putative nitrate transporter narT
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5983012..5984184
- synteny block?: BlockID0046590
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2325 (narK)
08BA02176:
C248_2435 (narT)
11819-97:
MS7_2405 (narT)
6850:
RSAU_002226 (narT)
71193:
ST398NM01_2441
ECT-R 2:
ECTR2_2247
ED133:
SAOV_2434c
ED98:
SAAV_2453
HO 5096 0412:
SAEMRSA15_22870 (narT)
JH1:
SaurJH1_2459
JH9:
SaurJH9_2412
JKD6008:
SAA6008_02427 (narK)
JKD6159:
SAA6159_02291 (narK)
LGA251:
SARLGA251_21720 (narT)
M013:
M013TW_2348
MRSA252:
SAR2476 (narT)
MSHR1132:
SAMSHR1132_22160
MSSA476:
SAS2278
Mu3:
SAHV_2372 (narK)
Mu50:
SAV2388 (narK)
MW2:
MW2308 (narK)
RF122:
SAB2267c (narT)
ST398:
SAPIG2441
T0131:
SAT0131_02578 (ileS)
TCH60:
HMPREF0772_10800 (narK)
TW20:
SATW20_25180 (narT)
USA300_TCH1516:
USA300HOU_2369 (narK)
VC40:
SAVC_10805
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MYKTKGGFQLTLQTLSLVVGFMAWSIIAPLMPFIKQDVNVTEGQISIILAIPVILGSVLR
N315 MYKTKGGFQLTLQTLSLVVGFMAWSIIAPLMPFIKQDVNVTEGQISIILAIPVILGSVLR
NCTC8325 MYKTKGGFQLTLQTLSLVVGFMAWSIIAPLMPFIKQDVNVTEGQISIILAIPVILGSVLR
Newman MYKTKGGFQLTLQTLSLVVGFMAWSIIAPLMPFIKQDVNVTEGQISIILAIPVILGSVLR
USA300_FPR3757 MYKTKGGFQLTLQTLSLVVGFMAWSIIAPLMPFIKQDVNVTEGQISIILAIPVILGSVLR
************************************************************
COL VPFGYLTNIVGAKWVFFTSFIVLLFPIFFLSQAQTPGMLMASGFFLGVGGAIFSVGVTSV
N315 VPFGYLTNIVGAKWVFFTSFIVLLFPIFFLSQAQTPGMLMASGFFLGVGGAIFSVGVTSV
NCTC8325 VPFGYLTNIVGAKWVFFTSFIVLLFPIFFLSQAQTPGMLMASGFFLGVGGAIFSVGVTSV
Newman VPFGYLTNIVGAKWVFFTSFIVLLFPIFFLSQAQTPGMLMASGFFLGVGGAIFSVGVTSV
USA300_FPR3757 VPFGYLTNIVGAKWVFFTSFIVLLFPIFFLSQAQTPGMLMASGFFLGVGGAIFSVGVTSV
************************************************************
COL PKYFPKEKVGLANGIYGMGNIGTAVSSFLAPPIAGIIGWQTTVRSYLIIIALFALIMFIF
N315 PKYFPKEKVGLANGIYGMGNIGTAVSSFLAPPIAGIIGWQTTVRSYLIIIALFALIMFIF
NCTC8325 PKYFPKEKVGLANGIYGMGNIGTAVSSFLAPPIAGIIGWQTTVRSYLIIIALFALIMFIF
Newman PKYFPKEKVGLANGIYGMGNIGTAVSSFLAPPIAGIIGWQTTVRSYLIIIALFALIMFIF
USA300_FPR3757 PKYFPKEKVGLANGIYGMGNIGTAVSSFLAPPIAGIIGWQTTVRSYLIIIALFALIMFIF
************************************************************
COL GDTQERKIKVPLMAQMKTLSKNYKLYYLSYWYFITFGAFVAFGIFLPNYLVNHFGIDKVD
N315 GDTQERKIKVPLMAQMKTLSKNYKLYYLSYWYFITFGAFVAFGIFLPNYLVNHFGIDKVD
NCTC8325 GDTQERKIKVPLMAQMKTLSKNYKLYYLSYWYFITFGAFVAFGIFLPNYLVNHFGIDKVD
Newman GDTQERKIKVPLMAQMKTLSKNYKLYYLSYWYFITFGAFVAFGIFLPNYLVNHFGIDKVD
USA300_FPR3757 GDTQERKIKVPLMAQMKTLSKNYKLYYLSYWYFITFGAFVAFGIFLPNYLVNHFGIDKVD
************************************************************
COL AGIRSGVFIALATFLRPIGGILGDKFNAVKVLMIDFVVMIIGAIILGISDHIALFTVGCL
N315 AGIRSGVFIALATFLRPIGGILGDKFNAVKVLMIDFVIMIIGAVILGISDHIALFTVGCL
NCTC8325 AGIRSGVFIALATFLRPIGGILGDKFNAVKVLMIDFVVMIIGAIILGISDHIALFTVGCL
Newman AGIRSGVFIALATFLRPIGGILGDKFNAVKVLMIDFVVMIIGAIILGISDHIALFTVGCL
USA300_FPR3757 AGIRSGVFIALATFLRPIGGILGDKFNAVKVLMIDFVVMIIGAIILGISDHIALFTVGCL
*************************************:*****:****************
COL TISICAGIGNGLIFKLVPSYFLNEAGSANGIVSMMGGLGGFFPPLVITYVANLTGSSHLA
N315 TISICAGIGNGLIFKLVPSYFSNEAGSANGIVSMMGGLGGFFPPLVITYVANLTGSSHLA
NCTC8325 TISICAGIGNGLIFKLVPSYFLNEAGSANGIVSMMGGLGGFFPPLVITYVANLTGSSHLA
Newman TISICAGIGNGLIFKLVPSYFLNEAGSANGIVSMMGGLGGFFPPLVITYVANLTGSSHLA
USA300_FPR3757 TISICAGIGNGLIFKLVPSYFLNEAGSANGIVSMMGGLGGFFPPLVITYVANLTGSSHLA
********************* **************************************
COL FIFLAVFGCIALFTMRHLYQKEYGSLKNG
N315 FIFLAVFGCIALFTMRHLYQKEYGSLKHS
NCTC8325 FIFLAVFGCIALFTMRHLYQKEYGSLKNG
Newman FIFLAVFGCIALFTMRHLYQKEYGSLKNG
USA300_FPR3757 FIFLAVFGCIALFTMRHLYQKEYGSLKNG
***************************:.