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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005775000
- symbol?: —
- synonym:
- description?: 2-hydroxyacid dehydrogenase
- 2-hydroxyacid dehydrogenase
- glycerate dehydrogenase
- D-isomer specific 2-hydroxyacid dehydrogenase family protein
- D-isomer specific 2-hydroxyacid dehydrogenase NAD binding domain-containing protein
- glycerate dehydrogenase, putative
- glycerate dehydrogenase-like protein
- Glyoxylate reductase / Glyoxylate reductase / Hydroxypyruvate reductase
- putative D-isomer specific 2-hydroxyaciddehydrogenase
- (R)-2-hydroxyacid dehydrogenase
- D-isomer specific 2-hydroxyacid dehydrogenase
- D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
- glyoxylate reductase (Glycolate reductase)
- glyoxylate reductase (NAD+)
- Putative 2-hydroxyacid dehydrogenase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5864026..5864979
- synteny block?: BlockID0045210
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2243
08BA02176:
C248_2345
11819-97:
MS7_2322
6850:
RSAU_002137
71193:
ST398NM01_2355
ECT-R 2:
ECTR2_2164
ED133:
SAOV_2344
ED98:
SAAV_2366
HO 5096 0412:
SAEMRSA15_22020
JH1:
SaurJH1_2371
JH9:
SaurJH9_2328
JKD6008:
SAA6008_02340
JKD6159:
SAA6159_02208
LGA251:
SARLGA251_20870
M013:
M013TW_2261
MRSA252:
SAR2389
MSHR1132:
SAMSHR1132_21290
MSSA476:
SAS2196
Mu3:
SAHV_2289
Mu50:
SAV2305
MW2:
MW2224
RF122:
SAB2178
ST398:
SAPIG2355
T0131:
SAT0131_02483 (fda)
TCH60:
HMPREF0772_10892 (gyaR)
TW20:
SATW20_24350
USA300_TCH1516:
USA300HOU_2286
VC40:
SAVC_10380
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEKVYVAGAIPEVGLKLLQEHFEVEMYEGKGLVDKDTLIKGVKNATALISLLSTNVDKDV
N315 MEKVYVAGAIPEVGLKLLQEHFEVEMYEGKGLVDKDTLIKGVKNATALISLLSTNVDKDV
NCTC8325 MEKVYVAGAIPEVGLKLLQEHFEVEMYEGKGLVDKDTLIKGVKNATALISLLSTNVDKDV
Newman MEKVYVAGAIPEVGLKLLQEHFEVEMYEGKGLVDKDTLIKGVKNATALISLLSTNVDKDV
USA300_FPR3757 MEKVYVAGAIPEVGLKLLQEHFEVEMYEGKGLVDKDTLIKGVKNATALISLLSTNVDKDV
************************************************************
COL IDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVE
N315 IDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVE
NCTC8325 IDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVE
Newman IDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVE
USA300_FPR3757 IDAGKDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVE
************************************************************
COL GDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKE
N315 GDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKE
NCTC8325 GDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKE
Newman GDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKE
USA300_FPR3757 GDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKE
************************************************************
COL EKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIV
N315 EKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTVYLINASRGPIV
NCTC8325 EKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIV
Newman EKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIV
USA300_FPR3757 EKEREIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTAYLINASRGPIV
************************************************.***********
COL HEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIVA
N315 HEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIVA
NCTC8325 HEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIVA
Newman HEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIVA
USA300_FPR3757 HEQALVQALKDNEIEGAALDVYEFEPDITDDLKSLNNVVLTPHIGNATFEARDMMSKIVA
************************************************************
COL NAAISAVQGEKPQFVVN
N315 NAAISAVQGEKPQFVVN
NCTC8325 NAAISAVQGEKPQFVVN
Newman NAAISAVQGEKPQFVVN
USA300_FPR3757 NAAISAVQGEKPQFVVN
*****************