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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005749000
- symbol?: ydbM
- synonym:
- description?: acyl-CoA dehydrogenase
- acyl-CoA dehydrogenase
- acyl-CoA dehydrogenase-related protein
- acyl-CoA/acyl-ACP dehydrogenase
- acyl-CoA dehydrogenase-like protein
- butyryl-CoA dehydrogenase-like protein
- acyl-CoA dehydrogenase, middle domain-containing protein
- acyl-CoA dehydrogenase, N-terminal domain protein
- Acyl-CoA dehydrogenase, short-chain specific
- Acyl-CoA dehydrogenase, type 2, C-terminal domain protein
- acyl-CoA dehydrogenase type 2
- butyryl-CoA dehydrogenase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5845677..5846623
- synteny block?: BlockID0044950
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2223
08BA02176:
C248_2324
11819-97:
MS7_2304
6850:
RSAU_002119
71193:
ST398NM01_2336
ECT-R 2:
ECTR2_2146
ED133:
SAOV_2324c
ED98:
SAAV_2348
HO 5096 0412:
SAEMRSA15_21830
JH1:
SaurJH1_2352
JH9:
SaurJH9_2310
JKD6008:
SAA6008_02322 (caiA)
JKD6159:
SAA6159_02190 (caiA)
LGA251:
SARLGA251_20690
M013:
M013TW_2243
MRSA252:
SAR2369
MSHR1132:
SAMSHR1132_21110
MSSA476:
SAS2175
Mu3:
SAHV_2269
Mu50:
SAV2285
MW2:
MW2203
RF122:
SAB2157c
ST398:
SAPIG2336
T0131:
SAT0131_02463
TCH60:
HMPREF0772_10912
TW20:
SATW20_24170
USA300_TCH1516:
USA300HOU_2267
VC40:
SAVC_10290
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNDMDNSFLITTEIQRKWIEKFKVIRDTFKAKAEYNDQHSQFPYKNIEWLIKEGYGKLTL
N315 MNDMDNSFLITTEIQRKWIEKFKVIRDTFKAKAEYNDQHSQFPYKNIEWLIKEGYGKLTL
NCTC8325 MNDMDNSFLITTEIQRKWIEKFKVIRDTFKAKAEYNDQHSQFPYKNIEWLIKEGYGKLTL
Newman ------------------------------------------------------------
USA300_FPR3757 MNDMDNSFLITTEIQRKWIEKFKVIRDTFKAKAEYNDQHSQFPYKNIEWLIKEGYGKLTL
COL PKAYGGEGATIEDMVILQSFLGELDGATALSIGWHVSVVGQIYEQKLWSQDMLEQFAVEI
N315 PKAYGGEGATIEDMVILQSFLGELDGATALSIGWHVSVVGQIYEQKLWSQDMLEQFAVEI
NCTC8325 PKAYGGEGATIEDMVILQSFLGELDGATALSIGWHVSVVGQIYEQKLWSQDMLEQFAVEI
Newman -------------MVILQSFLGELDGATALSIGWHVSVVGQIYEQKLWSQDMLEQFAVEI
USA300_FPR3757 PKAYGGEGATIEDMVILQSFLGELDGATALSIGWHVSVVGQIYEQKLWSQDMLEQFAVEI
***********************************************
COL NNGALVNRAVSEAEMGSPTRGGRPSTHAVKADDGYILNGVKTYTSMSKALTHIIVAAYIE
N315 NNGALVNRAVSEAEMGSPTRGGRPSTHAVKADDGYILNGVKTYTSMSKALTHIIVAAYIE
NCTC8325 NNGALVNRAVSEAEMGSPTRGGRPSTHAVKADDGYILNGVKTYTSMSKALTHIIVAAYIE
Newman NNGALVNRAVSEAEMGSPTRGGRPSTHAVKADDGYILNGVKTYTSMSKALTHIIVAAYIE
USA300_FPR3757 NNGALVNRAVSEAEMGSPTRGGRPSTHAVKADDGYILNGVKTYTSMSKALTHIIVAAYIE
************************************************************
COL ELESVGFFLVDRNLPGVEIADNWDVLGMRATESHDLILNDVKVPLKHLVETEKSKAPNGW
N315 ELESVGFFLVDRNLPGVEIADNWDVLGMRATESHDLILNDVKVPLKHLVETEKSKAPNGW
NCTC8325 ELESVGFFLVDRNLPGVEIADNWDVLGMRATESHDLILNDVKVPLKHLVETEKSKAPNGW
Newman ELESVGFFLVDRNLPGVEIADNWDVLGMRATESHDLILNDVKVPLKHLVETEKSKAPNGW
USA300_FPR3757 ELESVGFFLVDRNLPGVEIADNWDVLGMRATESHDLILNDVKVPLKHLVETEKSKAPNGW
************************************************************
COL ILHIPSCYLGIAQAARNYAVDFAIQHSPNSIEGTIATLPTVQQNLGKMETLLLCARQFLW
N315 ILHIPSCYLGIAQAARNYAVDFAIQHSPNSIEGTIATLPTVQQNLGKMETLLLCARQFLW
NCTC8325 ILHIPSCYLGIAQAARNYAVDFAIQHSPNSIEGTIATLPTVQQNLGKMETLLLCARQFLW
Newman ILHIPSCYLGIAQAARNYAVDFAIQHSPNSIEGTIATLPTVQQNLGKMETLLLCARQFLW
USA300_FPR3757 ILHIPSCYLGIAQAARNYAVDFAIQHSPNSIEGTIATLPTVQQNLGKMETLLLCARQFLW
************************************************************
COL STAKGYQQYKDDSQIRNPTSASKVMVMNQGLEVIDLAMRIVGAKSLEMNRPLQRYYRDMR
N315 STAKGYQQYKDDSQIRNPTSASKVMVMNQGLEVIDLAMRIVGAKSLEMNRPLQRYYRDMR
NCTC8325 STAKGYQQYKDDSQIRNPTSASKVMVMNQGLEVIDLAMRIVGAKSLEMNRPLQRYYRDMR
Newman STAKGYQQYKDDSQIRNPTSASKVMVMNQGLEVIDLAMRIVGAKSLEMNRPLQRYYRDMR
USA300_FPR3757 STAKGYQQYKDDSQIRNPTSASKVMVMNQGLEVIDLAMRIVGAKSLEMNRPLQRYYRDMR
************************************************************
COL AGLHNPPMEDAAYTNIAKSITDTF
N315 AGLHNPPMEDAAYTNIAKSITDTF
NCTC8325 AGLHNPPMEDAAYTNIAKSITDTF
Newman AGLHNPPMEDAAYTNIAKSITDTF
USA300_FPR3757 AGLHNPPMEDAAYTNIAKSITDTF
************************