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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005572000
- symbol?: sfnaD
- synonym:
- description?: IucA/IucC family siderophore biosynthesis protein
- IucA/IucC family siderophore biosynthesis protein
- aerobactin biosynthesis protein
- D-ornithine--citrate ligase SfnaD
- IucA-IucC family aerobactin biosynthesis protein, putative
- Aerobactin biosynthesis IucA/IucC family protein
- aerobactin biosynthesis protein, IucA/IucC family
- IucA/IucC family aerobactin biosynthesis protein
- iucA / IucC family protein
- putative siderophore biosynthesis protein
- Siderophore biosynthesis protein
- Siderophore synthase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5714073..5716046
- synteny block?: BlockID0043320
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2119
08BA02176:
C248_2219
11819-97:
MS7_2204
6850:
RSAU_002025
71193:
ST398NM01_2241
ECT-R 2:
ECTR2_2042
ED133:
SAOV_2228
ED98:
SAAV_2242
HO 5096 0412:
SAEMRSA15_20860
JH1:
SaurJH1_2251
JH9:
SaurJH9_2212
JKD6008:
SAA6008_02219
JKD6159:
SAA6159_02092
LGA251:
SARLGA251_19760
M013:
M013TW_2147
MRSA252:
SAR2272
MSHR1132:
SAMSHR1132_20130
MSSA476:
SAS2082
Mu3:
SAHV_2165
Mu50:
SAV2181
MW2:
MW2107
RF122:
SAB2062
ST398:
SAPIG2241
T0131:
SAT0131_02350
TCH60:
HMPREF0772_11010
TW20:
SATW20_23160
USA300_TCH1516:
USA300HOU_2173
VC40:
SAVC_09775
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNLNLIFKEQTLKFNKEEQETYLFLQQHNSDWANIFKEMILQGRDKVTQRLVTSMHRENL
N315 MNLNLIFKEQTLKFNKEEQETYLFLQQHNSDWANIFKEMILQGRDKVTQRLVTSMHRENL
NCTC8325 MNLNLIFKEQTLKFNKEEQETYLFLQQHNSDWANIFKEMILQGRDKVTQRLVTSMHRENL
Newman MNLNLIFKEQTLKFNKEEQETYLFLQQHNSDWANIFKEMILQGRDKVTQRLVTSMHRENL
USA300_FPR3757 MNLNLIFKEQTLKFNKEEQETYLFLQQHNSDWANIFKEMILQGRDKVTQRLVTSMHRENL
************************************************************
COL VKARTQSKKILSRDLIMLDISTTHILEIQFPQAKQTLYAPITGEHAFDRIDVEGPFYIKD
N315 VKARTQSKKILSRDLIMLDISTTHILEIQFPQAKQTLYAPITGEHAFDRIDVEGPFYIKD
NCTC8325 VKARTQSKKILSRDLIMLDISTTHILEIQFPQAKQTLYAPITGEHAFDRIDVEGPFYIKD
Newman VKARTQSKKILSRDLIMLDISTTHILEIQFPQAKQTLYAPITGEHAFDRIDVEGPFYIKD
USA300_FPR3757 VKARTQSKKILSRDLIMLDISTTHILEIQFPQAKQTLYAPITGEHAFDRIDVEGPFYIKD
************************************************************
COL DITNTITRVHHPNEILECILIEAPDLKNAASDQFQQDLINSATNMTFAISYQALSMQHDS
N315 DITNTITRVHHPNEILECILIEAPDLKNAASDQFQQDLINSATNMTFAISYQALSMQHDS
NCTC8325 DITNTITRVHHPNEILECILIEAPDLKNAASDQFQQDLINSATNMTFAISYQALSMQHDS
Newman DITNTITRVHHPNEILECILIEAPDLKNAASDQFQQDLINSATNMTFAISYQALSMQHDS
USA300_FPR3757 DITNTITRVHHPNEILECILIEAPDLKNAASDQFQQDLINSATNMTFAISYQALSMQHDS
************************************************************
COL APLFNIIENSEDSYLRSEQAVIEGHPLHPGAKLRKGLNALQTFLYSSEFNQPIKLKIVLI
N315 APLFNIIENSEDSYLRSEQAVIEGHPLHPGAKLRKGLNALQTFLYSSEFNQPIKLKIVLI
NCTC8325 APLFNIIENSEDSYLRSEQAVIEGHPLHPGAKLRKGLNALQTFLYSSEFNQPIKLKIVLI
Newman APLFNIIENSEDSYLRSEQAVIEGHPLHPGAKLRKGLNALQTFLYSSEFNQPIKLKIVLI
USA300_FPR3757 APLFNIIENSEDSYLRSEQAVIEGHPLHPGAKLRKGLNALQTFLYSSEFNQPIKLKIVLI
************************************************************
COL HSKLSRTMSLSKDYDTTVHQLFPDLIKQLENEFTPKFNFNDYHIMIVHPWQLDDVLHSDY
N315 HSKLSRTMSLSKDYDTTVHQLFPDLIKQLENEFTPNFNFNDYHIMIVHPWQLDDVLHSDY
NCTC8325 HSKLSRTMSLSKDYDTTVHQLFPDLIKQLENEFTPKFNFNDYHIMIVHPWQLDDVLHSDY
Newman HSKLSRTMSLSKDYDTTVHQLFPDLIKQLENEFTPKFNFNDYHIMIVHPWQLDDVLHSDY
USA300_FPR3757 HSKLSRTMSLSKDYDTTVHQLFPDLIKQLENEFTPKFNFNDYHIMIVHPWQLDDVLHSDY
***********************************:************************
COL QAEVDKELIIEAKHTLDYYAGLSFRTLVPKYPAMSPHIKLSTNVHITGEIRTLSEQTTHN
N315 QAEVDKELIIEAKHTLDYYAGLSFRTLVPKYPAMSPHIKLSTNVHITGEIRTLSEQTTHN
NCTC8325 QAEVDKELIIEAKHTLDYYAGLSFRTLVPKYPAMSPHIKLSTNVHITGEIRTLSEQTTHN
Newman QAEVDKELIIEAKHTLDYYAGLSFRTLVPKYPAMSPHIKLSTNVHITGEIRTLSEQTTHN
USA300_FPR3757 QAEVDKELIIEAKHTLDYYAGLSFRTLVPKYPAMSPHIKLSTNVHITGEIRTLSEQTTHN
************************************************************
COL GPLMTRILNDILEKDVIFKSYASTIIDEVAGIHFYNEQDEADYQTERSEQLGTLFRKNIY
N315 GPLMTRILNDILEKDVIFKSYASTIIDEVAGIHFYNEQDEVDYQTERSEQLGTLFRKNIY
NCTC8325 GPLMTRILNDILEKDVIFKSYASTIIDEVAGIHFYNEQDEADYQTERSEQLGTLFRKNIY
Newman GPLMTRILNDILEKDVIFKSYASTIIDEVAGIHFYNEQDEADYQTERSEQLGTLFRKNIY
USA300_FPR3757 GPLMTRILNDILEKDVIFKSYASTIIDEVAGIHFYNEQDEADYQTERSEQLGTLFRKNIY
****************************************.*******************
COL QMIPQEVTPLIPSSLVATYPFNNESPIVTLIKRYQSAASLSDFESSAKSWVETYSKALLG
N315 QMIPQEVTPMIPSSLVATYPFNNESPIVTLIKRYQSAASLSDFESSAKSWIETYSKALLG
NCTC8325 QMIPQEVTPLIPSSLVATYPFNNESPIVTLIKRYQSAASLSDFESSAKSWVETYSKALLG
Newman QMIPQEVTPLIPSSLVATYPFNNESPIVTLIKRYQSAASLSDFESSAKSWVETYSKALLG
USA300_FPR3757 QMIPQEVTPLIPSSLVATYPFNNESPIVTLIKRYQSAASLSDFESSAKSWVETYSKALLG
*********:****************************************:*********
COL LVIPLVTKYGIALEAHLQNAIATFRKDGLLDTMYIRDFEGLRIDKAQLNEMGYSTSHFHE
N315 LVIPLVTKYGIALEAHLQNAIATFRKDGLLDTMYIRDFEGLRIDKAQLNEMGYSTSHFHE
NCTC8325 LVIPLVTKYGIALEAHLQNAIATFRKDGLLDTMYIRDFEGLRIDKAQLNEMVYSTSHFHE
Newman LVIPLVTKYGIALEAHLQNAIATFRKDGLLDTMYIRDFEGLRIDKAQLNEMGYSTSHFHE
USA300_FPR3757 LVIPLVTKYGIALEAHLQNAIATFRKDGLLDTMYIRDFEGLRIDKAQLNEMGYSTSHFHE
*************************************************** ********
COL KSRILTDSKTSVFNKAFYSTVQNHLGELILTISKASNDSNLERHMWYIVRDVLDNIFDQL
N315 KSRILTDSKTSVFNKAFYSTVQNHLGELILTISKASNDSNLERHMWYIVRDVLDNIFDQL
NCTC8325 KSRILTDSKTSVFNKAFYSTVQNHLGELILTISKASNDSNLERHMWYIVRDVLDNIFDQL
Newman KSRILTDSKTSVFNKAFYSTVQNHLGELILTISKASNDSNLERHMWYIVRDVLDNIFDQL
USA300_FPR3757 KSRILTDSKTSVFNKAFYSTVQNHLGELILTISKASNDSNLERHMWYIVRDVLDNIFDQL
************************************************************
COL VLSTHKSNQVNENRINEIKDTMFAPFIDYKCVTTMRLEDEAHHYTYIKVNNPLYRENN
N315 VLSTHKSNQVNENRINEIKDTMFAPFIDYKCVTTMRLEDEAHHYTYIKVNNPLYRENN
NCTC8325 VLSTHKSNQVNENRINEIKDTMFAPFIDYKCVTTMRLEDEAHHYTYIKVNNPLYRENN
Newman VLSTHKSNQVNENRINEIKDTMFAPFIDYKCVTTMRLEDEAHHYTYIKVNNPLYRENN
USA300_FPR3757 VLSTHKSNQVNENRINEIKDTMFAPFIDYKCVTTMRLEDEAHHYTYIKVNNPLYRENN
**********************************************************