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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005523000
- symbol?: trnaE
- synonym:
- description?: tRNA-Glu
- tRNA-Glu
- tRNA-His
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5678610..5678690
- synteny block?: BlockID0043020
- occurrence?: in 100% of 34 strains
trnaE : tRNA-GluUUC [1]
• None of the glutamyl-tRNAs were included in the modified nucleobase analysis in the above cited reference
Transfer RNA coding elements are organized in up to eleven loci in Staphylococcus aureus. Staphylococci encode up to three glutamyl-tRNA sequences, all of which share the same UUC anticodon. This tRNA-GluUUC3 is from Locus VII; other tRNA-Glu can be found elsewhere in Locus I (tRNA-GluUUC1), and in Locus IV (tRNA-GluUUC2 ). Please note that modifications on tRNA-GluUUC have not been determined.
⊟Orthologs[edit | edit source]
04-02981:
SA2981_tRNA62
08BA02176:
C248_2197 (trnaE)
11819-97:
MS7_2184
6850:
RSAU_002005
71193:
ST398NM01_r012
ECT-R 2:
ECTR2_2022
ED133:
SAOV_2208c
ED98:
SAAV_2223
HO 5096 0412:
SAEMRSA15_tRNA0060
JH1:
SaurJH1_R0077
JH9:
SaurJH9_R0077
JKD6008:
SAA6008_t59
JKD6159:
SAA6159_t56
JSNZ:
JSNZ_002129
LGA251:
SARLGA251_t32
M013:
M013TW_2127
MRSA252:
SARt059
MSHR1132:
SAMSHR1132_t51
MSSA476:
SASt059
Mu3:
SAHV_t0060
Mu50:
SAVtRNA59
MW2:
MWtRNA59
RF122:
SAB_t59
ST398:
SAPIG2224
T0131:
SAT0131_t013
TCH60:
HMPREF0772_t10014
TW20:
SATW20_t590
USA300_TCH1516:
USA300HOU_t0059
VC40:
SAVC_t12583
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues:
- ↑ Laura Antoine, Philippe Wolff, Eric Westhof, Pascale Romby, Stefano Marzi
Mapping post-transcriptional modifications in Staphylococcus aureus tRNAs by nanoLC/MSMS.
Biochimie: 2019, 164;60-69
[PubMed:31295507] [WorldCat.org] [DOI] (I p)