PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005506000
• symbol^?: glmM
• synonym:
• description^?: phosphoglucosamine mutase

  descriptions from strain specific annotations:

  • phosphoglucosamine mutase
  • Phosphoglucosamine mutase / FemD, factor involved in methicillin resistance
  • phosphoglucosamine mutase FemD, methicillin resistance
  • phosphoglucosamine mutase GlmM
  • putative phosphoglucosamine mutase
• strand^?: -
• coordinates^?: 5670777..5672132
• synteny block^?: BlockID0042880
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2151 (glmM)
N315:
SA1965 (glmM)
NCTC8325:
SAOUHSC_02405 (glmM)
Newman:
NWMN_2062 (glmM)
USA300_FPR3757:
SAUSA300_2111 (glmM)
04-02981:
SA2981_2100 (glmM)
08BA02176:
C248_2189
11819-97:
MS7_2176 (glmM)
6850:
RSAU_001997 (glmM)
71193:
ST398NM01_2216
ECT-R 2:
ECTR2_2014 (glmM)
ED133:
SAOV_2200c
ED98:
SAAV_2215 (glmM)
HO 5096 0412:
SAEMRSA15_20670
JH1:
SaurJH1_2231 (glmM)
JH9:
SaurJH9_2193 (glmM)
JKD6008:
SAA6008_02198 (glmM)
JKD6159:
SAA6159_02070 (glmM)
LGA251:
SARLGA251_19570
M013:
M013TW_2119
MRSA252:
SAR2252 (glmM)
MSHR1132:
SAMSHR1132_19930
MSSA476:
SAS2063 (glmM)
Mu3:
SAHV_2145 (glmM)
Mu50:
SAV2161 (glmM)
MW2:
MW2088 (glmM)
RF122:
SAB2041c (glmM)
ST398:
SAPIG2216 (glmM)
T0131:
SAT0131_02326
TCH60:
HMPREF0772_11031 (glmM)
TW20:
SATW20_22960
USA300_TCH1516:
USA300HOU_2151 (glmM)
VC40:
SAVC_09670 (glmM)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MGKYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPRVLVGRDTRVSGEMLES
  N315            MGKYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPRVLVGRDTRVSGEMLES
  NCTC8325        MGKYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPRVLVGRDTRVSGEMLES
  Newman          MGKYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPRVLVGRDTRVSGEMLES
  USA300_FPR3757  MGKYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPRVLVGRDTRVSGEMLES
                  ************************************************************
  
  COL             ALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISASHNPVADNGIKFFGSDGFK
  N315            ALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISASHNPVADNGIKFFGSDGFK
  NCTC8325        ALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISASHNPVADNGIKFFGSDGFK
  Newman          ALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISASHNPVADNGIKFFGSDGFK
  USA300_FPR3757  ALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISASHNPVADNGIKFFGSDGFK
                  ************************************************************
  
  COL             LSDEQENEIEALLDQENPELPRPVGNDIVHYSDYFEGAQKYLSYLKSTVDVNFEGLKIAL
  N315            LSDEQENEIEALLDQENPELPRPVGNDIVHYSDYFEGAQKYLSYLKSTVDVNFEGLKIVL
  NCTC8325        LSDEQENEIEALLDQENPELPRPVGNDIVHYSDYFEGAQKYLSYLKSTVDVNFEGLKIAL
  Newman          LSDEQENEIEALLDQENPELPRPVGNDIVHYSDYFEGAQKYLSYLKSTVDVNFEGLKIAL
  USA300_FPR3757  LSDEQENEIEALLDQENPELPRPVGNDIVHYSDYFEGAQKYLSYLKSTVDVNFEGLKIAL
                  **********************************************************.*
  
  COL             DGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKCGSTHPEKLAEKVVETESDFGLA
  N315            DGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKCGSTHPEKLAEKVVETESDFGLA
  NCTC8325        DGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKCGSTHPEKLAEKVVETESDFGLA
  Newman          DGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKCGSTHPEKLAEKVVETESDFGLA
  USA300_FPR3757  DGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKCGSTHPEKLAEKVVETESDFGLA
                  ************************************************************
  
  COL             FDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKNQELNNDMIVSTVMSNLGFYKALEQEG
  N315            FDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKNQELNNDMIVSTVMSNLGFYKALEQEG
  NCTC8325        FDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKNQELNNDMIVSTVMSNLGFYKALEQEG
  Newman          FDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKNQELNNDMIVSTVMSNLGFYKALEQEG
  USA300_FPR3757  FDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKNQELNNDMIVSTVMSNLGFYKALEQEG
                  ************************************************************
  
  COL             IKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVMMDYNTTGDGLLTGIQLASVIKMTGKS
  N315            IKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVMMDYNTTGDGLLTGIQLASVIKMTGKS
  NCTC8325        IKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVMMDYNTTGDGLLTGIQLASVIKMTGKS
  Newman          IKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVMMDYNTTGDGLLTGIQLASVIKMTGKS
  USA300_FPR3757  IKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVMMDYNTTGDGLLTGIQLASVIKMTGKS
                  ************************************************************
  
  COL             LSELAGQMKKYPQSLINVRVTDKYRVEENVDVKEVMTKVEVEMNGEGRILVRPSGTEPLV
  N315            LSELAGQMKKYPQSLINVRVTDKYRVEENVDVKEVMTKVEVEMNGEGRILVRPSGTEPLV
  NCTC8325        LSELAGQMKKYPQSLINVRVTDKYRVEENVDVKEVMTKVEVEMNGEGRILVRPSGTEPLV
  Newman          LSELAGQMKKYPQSLINVRVTDKYRVEENVDVKEVMTKVEVEMNGEGRILVRPSGTEPLV
  USA300_FPR3757  LSELAGQMKKYPQSLINVRVTDKYRVEENVDVKEVMTKVEVEMNGEGRILVRPSGTEPLV
                  ************************************************************
  
  COL             RVMVEAATDEDAERFAQQIADVVQDKMGLDK
  N315            RVMVEAATDEDAERFAQQIADVVQDKMGLDK
  NCTC8325        RVMVEAATDEDAERFAQQIADVVQDKMGLDK
  Newman          RVMVEAATDEDAERFAQQIADVVQDKMGLDK
  USA300_FPR3757  RVMVEAATDEDAERFAQQIADVVQDKMGLDK
                  *******************************