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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005308000
- symbol?: leuB
- synonym:
- description?: 3-isopropylmalate dehydrogenase
- strand?: +
- coordinates?: 5470252..5471298
- synteny block?: BlockID0041080
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1999 (leuB)
08BA02176:
C248_2064 (leuB)
11819-97:
MS7_2070 (leuB)
6850:
RSAU_001891 (leuB)
71193:
ST398NM01_2097
ECT-R 2:
ECTR2_1909 (leuB)
ED133:
SAOV_2095 (leuB)
ED98:
SAAV_2106 (leuB)
HO 5096 0412:
SAEMRSA15_19660 (leuB)
JH1:
SaurJH1_2132
JH9:
SaurJH9_2095
JKD6008:
SAA6008_02096 (leuB)
JKD6159:
SAA6159_01971 (leuB)
LGA251:
SARLGA251_18610 (leuB)
M013:
M013TW_2011
MRSA252:
SAR2145 (leuB)
MSHR1132:
SAMSHR1132_18800
MSSA476:
SAS1963
Mu3:
SAHV_2043 (leuB)
Mu50:
SAV2058 (leuB)
MW2:
MW1982 (leuB)
RF122:
SAB1943 (leuB)
ST398:
SAPIG2097 (leuB)
T0131:
SAT0131_02211
TCH60:
HMPREF0772_11140 (leuB)
TW20:
SATW20_21980 (leuB)
USA300_TCH1516:
USA300HOU_2053 (leuB)
VC40:
SAVC_09170
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEPLTEKTL
N315 MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEPLTEKTL
NCTC8325 MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEPLTEKTL
Newman MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEPLTEKTL
USA300_FPR3757 MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFGGASIDTFGEPLTEKTL
************************************************************
COL NACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFVNIRPTTVVKGASSLSPLKE
N315 NACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFANIRPTTVVKGASSLSPLKE
NCTC8325 NACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFVNIRPTTVVKGASSLSPLKE
Newman NACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFVNIRPTTVVKGASSLSPLKE
USA300_FPR3757 NACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFVNIRPTTVVKGASSLSPLKE
****************************************.*******************
COL ERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTREEIERIVHVAFKLAASRRGKL
N315 ERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTREEIERIVHVAFKLAASRRGKL
NCTC8325 ERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTREEIERIVHVAFKLAASRRGKL
Newman ERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTREEIERIVHVAFKLAASRRGKL
USA300_FPR3757 ERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTREEIERIVHVAFKLAASRRGKL
************************************************************
COL TSVDKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFG
N315 TSVDKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFG
NCTC8325 TSVDKENVLASSKLWRKVVNEVSQLYPEVTVNHLFVDACSMHLITNPKQFDVIVCENLFG
Newman TSVDKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFG
USA300_FPR3757 TSVDKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDACSMHLITNPKQFDVIVCENLFG
**********************************:*************************
COL DILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLR
N315 DILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLR
NCTC8325 DILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLR
Newman DILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLR
USA300_FPR3757 DILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLR
************************************************************
COL ESLNQPDAADELEQHIYSMIEHGQTTADLGGKLNTTDIFEILSQKLNH
N315 ESLNQPDAADELEQHIYNMIEHGQTTADLGGKLNTTDIFEILSQKLNH
NCTC8325 ESLNQPDAADELEQHIYSMIEHGQTTADLGGKLNTTDIFEILSQKLNH
Newman ESLNQPDAADELEQHIYSMIEHGQTTADLGGKLNTTDIFEILSQKLNH
USA300_FPR3757 ESLNQPDAADELEQHIYSMIEHGQTTADLGGKLNTTDIFEILSQKLNH
*****************.******************************