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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005291000
- symbol?: rex
- synonym:
- description?: redox-sensing transcriptional repressor Rex
- redox-sensing transcriptional repressor Rex
- transcriptional regulator
- Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)
- coA binding domain-containing protein
- CoA-binding protein
- DNA-binding family protein
- Redox-sensitive transcriptional regulator Rex
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5454682..5455317
- synteny block?: BlockID0040910
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1987
08BA02176:
C248_2050
11819-97:
MS7_2057
6850:
RSAU_001879 (rex)
71193:
ST398NM01_2084
ECT-R 2:
ECTR2_1897
ED133:
SAOV_2083c
ED98:
SAAV_2094
HO 5096 0412:
SAEMRSA15_19540
JH1:
SaurJH1_2120
JH9:
SaurJH9_2083
JKD6008:
SAA6008_02084 (rex)
JKD6159:
SAA6159_01959 (rex)
LGA251:
SARLGA251_18480
M013:
M013TW_1998
MRSA252:
SAR2133
MSHR1132:
SAMSHR1132_18680
MSSA476:
SAS1951
Mu3:
SAHV_2031
Mu50:
SAV2046
MW2:
MW1970
RF122:
SAB1930c
ST398:
SAPIG2084
T0131:
SAT0131_02197 (ampA)
TCH60:
HMPREF0772_11153
TW20:
SATW20_21860
USA300_TCH1516:
—
VC40:
SAVC_09110
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQIDSATIRRDFSYFGELG
N315 MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQIDSATIRRDFSYFGELG
NCTC8325 MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQIDSATIRRDFSYFGELG
Newman MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQIDSATIRRDFSYFGELG
USA300_FPR3757 MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQIDSATIRRDFSYFGELG
************************************************************
COL KKGYGYNIDSLLDFFKSELSESDMIKIAIVGVGNLGKALLTYNFSIHDDMTITEAFDVKE
N315 KKGYGYNIDSLLDFFKSELSESDMIKIAIVGVGNLGKALLTYNFSIHDDMTITEAFDVKE
NCTC8325 KKGYGYNIDSLLDFFKSELSESDMIKIAIVGVGNLGKALLTYNFSIHDDMTITEAFDVKE
Newman KKGYGYNIDSLLDFFKSELSESDMIKIAIVGVGNLGKALLTYNFSIHDDMTITEAFDVKE
USA300_FPR3757 KKGYGYNIDSLLDFFKSELSESDMIKIAIVGVGNLGKALLTYNFSIHDDMTITEAFDVKE
************************************************************
COL DVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQKVADELVQAGVKGILNFTPG
N315 DVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQKVADELVQAGVKGILNFTPG
NCTC8325 DVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQKVADELVQAGVKGILNFTPG
Newman DVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQKVADELVQAGVKGILNFTPG
USA300_FPR3757 DVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQKVADELVQAGVKGILNFTPG
************************************************************
COL RINTPSDVQVHQIDLGIELQSLLFFMKNYSE
N315 RINTPSDVQVHQIDLGIELQSLLFFMKNYSE
NCTC8325 RINTPSDVQVHQIDLGIELQSLLFFMKNYSE
Newman RINTPSDVQVHQIDLGIELQSLLFFMKNYSE
USA300_FPR3757 RINTPSDVQVHQIDLGIELQSLLFFMKNYSE
*******************************