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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005063000
- symbol?: —
- synonym:
- description?: phi77 ORF045-like protein
- phi77 ORF045-like protein
- phage protein
- phage terminase small subunit
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5229695..5229956
- synteny block?: BlockID0039360
- occurrence?: in 44% of 34 strains
gpc : serogroup F prophage genome packaging chaperone [1]
After procapsids have been assembled but before phage tails can be attached, the phage genome must be translocated into the procapsid. Genome packaging chaperones stimulate the interaction of procapsids and terminase-DNA complexes to facilitate productive genome loading.
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1924
08BA02176:
—
11819-97:
—
6850:
—
71193:
ST398NM01_2928
ECT-R 2:
ECTR2_1836
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_18780
JH1:
SaurJH1_2055
JH9:
SaurJH9_2019
JKD6008:
SAA6008_02018
JKD6159:
—
JSNZ:
—
LGA251:
—
M013:
—
MRSA252:
SAR2060
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_1948
Mu50:
SAV1962
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_02097
TCH60:
—
TW20:
SATW20_19550
USA300_TCH1516:
USA300HOU_1967
VC40:
—
⊟Genome Viewer[edit | edit source]
| N315 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
N315 MVKFKVVRAFKDIEHNQHKYKVGELYPAEGYNNPRVELLTNQIKNKYDKVYIVPLDKLTK
USA300_FPR3757 MVKFKVVRAFKDIEHNQHKYKVGELYPAEGYNNPRVELLTNQIKNKYDKVYIVPLDKLTK
************************************************************
N315 QELLELCESLQKKASSSMVKSEIVDLLNGEDNDD
USA300_FPR3757 QELLELCESLQKKASSSMVKSEIVDLLNGEDNDD
**********************************
- ↑ Ana Popovic, Bin Wu, Cheryl H Arrowsmith, Aled M Edwards, Alan R Davidson, Karen L Maxwell
Structural and biochemical characterization of phage λ FI protein (gpFI) reveals a novel mechanism of DNA packaging chaperone activity.
J Biol Chem: 2012, 287(38);32085-95
[PubMed:22801427] [WorldCat.org] [DOI] (I p)