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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004951000
- symbol?: sdcS
- synonym:
- description?: sodium-dependent dicarboxylate transporter SdcS
- sodium-dependent dicarboxylate transporter SdcS
- sodium-dependent transporter
- SLC13 family permease
- sodium-dependent dicarboxylate transporter sdcS, putative
- sodium-dependent transporter (huNaDC-1), putative
- anion transporter
- DASS family divalent anion:sodium (Na+) symporter
- putative sodium:sulfate symporter
- sodium:sulfate symporter
- sodium-dependent dicarboxylate transporter SdcS (Na(+)/dicarboxylatesymporter)
- sodium-sulfate symport protein
- transporter, divalent anion:Na+ symporter (DASS) family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5138479..5140041
- synteny block?: BlockID0038550
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1873
08BA02176:
C248_1993
11819-97:
MS7_1951 (sdcS)
6850:
RSAU_001803 (sdcS)
71193:
ST398NM01_2011
ECT-R 2:
ECTR2_1788
ED133:
SAOV_2019
ED98:
SAAV_1983
HO 5096 0412:
SAEMRSA15_18260
JH1:
SaurJH1_2006
JH9:
SaurJH9_1972
JKD6008:
SAA6008_01937
JKD6159:
SAA6159_01848
LGA251:
SARLGA251_18010
M013:
M013TW_1953
MRSA252:
SAR2009
MSHR1132:
SAMSHR1132_17610
MSSA476:
SAS1840
Mu3:
SAHV_1901
Mu50:
SAV1916
MW2:
MW1857
RF122:
SAB1853c
ST398:
SAPIG2011
T0131:
SAT0131_02045
TCH60:
HMPREF0772_11225
TW20:
SATW20_19110
USA300_TCH1516:
USA300HOU_1918
VC40:
SAVC_08845
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAYFNQHQSMISKRYLTFFSKSKKKKPFSAGQLIGLILGPLLFLLTLLFFHPQDLPWKGV
N315 MAYFNQHQSMISKRYLTFFSKSKKKKPFSAGQLIGLILGPLLFLLTLLFFHPQDLPWKGV
NCTC8325 MAYFNQHQSMISKRYLTFFSKSKKKKPFSAGQLIGLILGPLLFLLTLLFFHPQDLPWKGV
Newman MAYFNQHQSMISKRYLTFFSKSKKKKPFSAGQLIGLILGPLLFLLTLLFFHPQDLPWKGV
USA300_FPR3757 MAYFNQHQSMISKRYLTFFSKSKKKKPFSAGQLIGLILGPLLFLLTLLFFHPQDLPWKGV
************************************************************
COL YVLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFIL
N315 YVLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFIL
NCTC8325 YVLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFIL
Newman YVLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFIL
USA300_FPR3757 YVLAITLWIATWWITEAIPIAATSLLPIVLLPLGHILTPEQVSSEYGNDIIFLFLGGFIL
************************************************************
COL AIAMERWNLHTRVALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVMIMIPIGLAII
N315 AIAMERWNLHTRVALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVMIMIPIGLAII
NCTC8325 AIAMERWNLHTRVALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVMIMIPIGLAII
Newman AIAMERWNLHTRVALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVMIMIPIGLAII
USA300_FPR3757 AIAMERWNLHTRVALTIINLIGASTSKILLGFMVATGFLSMFVSNTAAVMIMIPIGLAII
************************************************************
COL KEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEI
N315 KEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEI
NCTC8325 KEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEI
Newman KEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGHEI
USA300_FPR3757 KEAHDLQEANTNQTSIQKFEKSLVLAIGYAGTIGGLGTLIGTPPLIILKGQYMQHFGYEI
*********************************************************:**
COL SFAKWMIVGIPTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVV
N315 SFAKWMIVGIPTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVV
NCTC8325 SFAKWMIVGIPTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVV
Newman SFAKWMIVGIPTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVV
USA300_FPR3757 SFAKWMIVGIPTVIVLLGITWLYLRYVAFRHDLKYLPGGQTLIKQKLDELGKMKYEEKVV
************************************************************
COL QTIFVLASLLWITREFLLKKWEVTSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVA
N315 QTIFVLASLLWITREFLLKKWEVTSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVA
NCTC8325 QTIFVLASLLWITREFLLKKWEVTSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVA
Newman QTIFVLASLLWITREFLLKKWEVTSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVA
USA300_FPR3757 QTIFVLASLLWITREFLLKKWEVTSSVADGTIAIFISILLFIIPAKNTEKHRRIIDWEVA
************************************************************
COL KELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVT
N315 KELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVT
NCTC8325 KELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVT
Newman KELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVT
USA300_FPR3757 KELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVT
************************************************************
COL SNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK
N315 SNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK
NCTC8325 SNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK
Newman SNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK
USA300_FPR3757 SNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIK
************************************************************
COL QMASVGFWVNLISAIIIILVVYYVMPIVLGIDINQPLPLK
N315 QMASVGFWVNLISAIIIILVVYYVMPIVLGIDINQPLPLK
NCTC8325 QMASVGFWVNLISAIIIILVVYYVMPIVLGIDINQPLPLK
Newman QMASVGFWVNLISAIIIILVVYYVMPIVLGIDINQPLPLK
USA300_FPR3757 QMASVGFWVNLISAIIIILVVYYVMPIVLGIDINQPLPLK
****************************************