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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004944000
- symbol?: —
- synonym:
- description?: DUF2179 domain-containing protein
- DUF2179 domain-containing protein
- hypothetical protein with DUF2179
- Integral membrane protein
- protein_1892
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5133003..5133605
- synteny block?: BlockID0038480
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1868
08BA02176:
C248_1987
11819-97:
MS7_1946
6850:
RSAU_001798
71193:
ST398NM01_2006
ECT-R 2:
ECTR2_1783
ED133:
SAOV_2014
ED98:
SAAV_1978
HO 5096 0412:
SAEMRSA15_18210
JH1:
SaurJH1_2001
JH9:
SaurJH9_1967
JKD6008:
SAA6008_01932
JKD6159:
SAA6159_01843
LGA251:
SARLGA251_17960
M013:
M013TW_1948
MRSA252:
SAR2004
MSHR1132:
SAMSHR1132_17560
MSSA476:
SAS1835
Mu3:
SAHV_1896
Mu50:
SAV1911
MW2:
MW1852
RF122:
SAB1848c
ST398:
SAPIG2006
T0131:
SAT0131_02039
TCH60:
HMPREF0772_11230
TW20:
SATW20_19060
USA300_TCH1516:
USA300HOU_1913
VC40:
SAVC_08820
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSFVTENPWLMVLTIFIINVCYVTFLTMRTILTLKGYRYIAASVSFLEVLVYIVGLGLVM
N315 MSFVTENPWLMVLTIFIINVCYVTFLTMRTILTLKGYRYIAASVSFLEVLVYIVGLGLVM
NCTC8325 MSFVTENPWLMVLTIFIINVCYVTFLTMRTILTLKGYRYIAASVSFLEVLVYIVGLGLVM
Newman MSFVTENPWLMVLTIFIINVCYVTFLTMRTILTLKGYRYIAASVSFLEVLVYIVGLGLVM
USA300_FPR3757 MSFVTENPWLMVLTIFIINICYVTFLTMRTILTLKGYRYIAASVSFLEVLVYIVGLGLVM
*******************:****************************************
COL SNLDHIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSAEYELDLPNELRNLGYGVT
N315 SNLDHIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSAEYELDLPNELRNLGYGVT
NCTC8325 SNLDHIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSAEYELDLPNELRNLGYGVT
Newman SNLDHIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSAEYELDLPNELRNLGYGVT
USA300_FPR3757 SNLDHIQNIIAYAFGFSIGIIVGMKIEEKLALGYTVVNVTSAEYELDLPNELRNLGYGVT
************************************************************
COL HYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFIIAYEPRNIHGGFWTKGIRRRK
N315 HYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFIIAYEPRNIHGGFWTKGIRRRK
NCTC8325 HYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFIIAYEPRNIHGGFWTKGIRRRK
Newman HYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFIIAYEPRNIHGGFWTKGIRRRK
USA300_FPR3757 HYAAFGRDGSRMVMQILTPRKYERKLMDTIKNLDPKAFIIAYEPRNIHGGFWTKGIRRRK
************************************************************
COL LKDYEPEELESVVEHEIQSK
N315 LKDYEPEELESVVEHEIQSK
NCTC8325 LKDYEPEELESVVEHEIQSK
Newman LKDYEPEELESVVEHEIQSK
USA300_FPR3757 LKDYEPEELESVVEHEIQSK
********************