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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004928000
- symbol?: gatC
- synonym:
- description?: aspartyl/glutamyl-tRNA amidotransferase subunit C
- aspartyl/glutamyl-tRNA amidotransferase subunit C
- aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
- aspartyl/glutamyl-tRNA(Gln) amidotransferase, C subunit
- Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
- Aspartyl-tRNA(Asn) amidotransferase subunit C
- Glutamyl-tRNA(Gln) amidotransferase subunit C
- bifunctional aspartyl/glutamyl-tRNA amidotransferase subunit C
- glutamyl-tRNA(Gln) amidotransferase, C subunit
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5116521..5116823
- synteny block?: BlockID0038340
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1858
08BA02176:
C248_1976 (gatC)
11819-97:
MS7_1936 (gatC)
6850:
RSAU_001788 (gatC1)
71193:
ST398NM01_1995
ECT-R 2:
ECTR2_1773 (gatC)
ED133:
SAOV_2001
ED98:
SAAV_1967 (gatC)
HO 5096 0412:
SAEMRSA15_18080 (gatC)
JH1:
SaurJH1_1990 (gatC)
JH9:
SaurJH9_1956 (gatC)
JKD6008:
SAA6008_01922 (gatC)
JKD6159:
SAA6159_01832 (gatC)
LGA251:
SARLGA251_17840 (gatC)
M013:
M013TW_1938
MRSA252:
SAR1993 (gatC)
MSHR1132:
SAMSHR1132_17460
MSSA476:
SAS1824 (gatC)
Mu3:
SAHV_1886 (gatC)
Mu50:
SAV1901 (gatC)
MW2:
MW1842 (gatC)
RF122:
SAB1834c (gatC)
ST398:
SAPIG1995 (gatC)
T0131:
SAT0131_02027
TCH60:
HMPREF0772_11241 (gatC2)
TW20:
SATW20_18960 (gatC)
USA300_TCH1516:
USA300HOU_1902 (gatC)
VC40:
SAVC_08765 (gatC)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQ
N315 MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQ
NCTC8325 MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQ
Newman MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQ
USA300_FPR3757 MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQ
************************************************************
COL NVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
N315 NVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
NCTC8325 NVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
Newman NVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDL
USA300_FPR3757 NVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
***************************************