⊟Summary[edit | edit source]

pan ID^?: SAUPAN004927000
symbol^?: gatA
synonym:
description^?: aspartyl/glutamyl-tRNA amidotransferase subunit A
- aspartyl/glutamyl-tRNA amidotransferase subunit A
- glutamyl-tRNA(Gln) amidotransferase subunit A
- aspartyl/glutamyl-tRNA amidotransferase, A subunit
- Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
- aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
- Aspartyl-tRNA(Asn) amidotransferase subunit A, Glutamyl-tRNA(Gln) amidotransferase subunit A
- glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADTsubunit A)
strand^?: -
coordinates^?: 5115062..5116519
synteny block^?: BlockID0038330
occurrence^?: in 100% of 33 strains

⊟Orthologs[edit | edit source]

COL:

SACOL1961 (gatA)

N315:

SA1716 (gatA)

NCTC8325:

SAOUHSC_02117 (gatA)

Newman:

NWMN_1838 (gatA)

USA300_FPR3757:

SAUSA300_1881 (gatA)

04-02981:

SA2981_1857

08BA02176:

C248_1975 (gatA)

11819-97:

MS7_1935 (gatA)

6850:

RSAU_001787 (gatA)

71193:

ST398NM01_1994

ECT-R 2:

ECTR2_1772 (gatA)

ED133:

SAOV_2000

ED98:

SAAV_1966 (gatA)

HO 5096 0412:

SAEMRSA15_18070 (gatA)

JH1:

SaurJH1_1989 (gatA)

JH9:

SaurJH9_1955 (gatA)

JKD6008:

SAA6008_01921 (gatA)

JKD6159:

SAA6159_01831 (gatA)

LGA251:

SARLGA251_17830 (gatA)

M013:

M013TW_1937

MRSA252:

SAR1992 (gatA)

MSHR1132:

SAMSHR1132_17450

MSSA476:

SAS1823 (gatA)

Mu3:

SAHV_1885 (gatA)

Mu50:

SAV1900 (gatA)

MW2:

MW1841 (gatA)

RF122:

SAB1833c (gatA)

ST398:

SAPIG1994

T0131:

SAT0131_02026 (eno)

TCH60:

HMPREF0772_11242 (gatA)

TW20:

SATW20_18950 (gatA)

USA300_TCH1516:

USA300HOU_1901 (gatA)

VC40:

SAVC_08760 (gatA)

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.307)

COL             MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE
N315            MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE
NCTC8325        MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE
Newman          MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE
USA300_FPR3757  MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDE
                ************************************************************

COL             LQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIG
N315            LQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIG
NCTC8325        LQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIG
Newman          LQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIG
USA300_FPR3757  LQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIG
                ****************************************************:*******

COL             KLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIR
N315            KLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIR
NCTC8325        KLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIR
Newman          KLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIR
USA300_FPR3757  KLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIR
                ************************************************:***********

COL             QPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTS
N315            QPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTS
NCTC8325        QPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTS
Newman          QPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTS
USA300_FPR3757  QPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADVNDSTS
                ************************************************************

COL             APVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLP
N315            APVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLP
NCTC8325        APVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLP
Newman          APVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLP
USA300_FPR3757  APVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLP
                ************************************************************

COL             NTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIF
N315            NTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIF
NCTC8325        NTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIF
Newman          NTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIF
USA300_FPR3757  NTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIF
                ************************************************************

COL             LGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLT
N315            LGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLT
NCTC8325        LGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLT
Newman          LGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLT
USA300_FPR3757  LGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLT
                ************************************************************

COL             MYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHD
N315            MYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHD
NCTC8325        MYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHD
Newman          MYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHD
USA300_FPR3757  MYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHD
                ************************************************************

COL             VYEKL
N315            VYEKL
NCTC8325        VYEKL
Newman          VYEKL
USA300_FPR3757  VYEKL
                *****

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Contents

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]