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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004842000
- symbol?: —
- synonym:
- description?: 2-hydroxyacid dehydrogenase
- 2-hydroxyacid dehydrogenase
- D-isomer specific 2-hydroxyacid dehydrogenase family protein
- D-3-phosphoglycerate dehydrogenase, putative
- D-isomer specific 2-hydroxyacid dehydrogenase
- D-3-phosphoglycerate dehydrogenase
- D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein
- D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
- Phosphoglycerate dehydrogenase-like dehydrogenase
- phosphoglycerate dehydrogenase-related dehydrogenase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5049648..5050598
- synteny block?: BlockID0037720
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1818
08BA02176:
C248_1933
11819-97:
MS7_1897
6850:
RSAU_001749
71193:
ST398NM01_1955
ECT-R 2:
ECTR2_1733
ED133:
SAOV_1889
ED98:
SAAV_1912
HO 5096 0412:
SAEMRSA15_17690
JH1:
SaurJH1_1950
JH9:
SaurJH9_1916
JKD6008:
SAA6008_01819
JKD6159:
SAA6159_01793
LGA251:
SARLGA251_17440
M013:
M013TW_1896
MRSA252:
SAR1952
MSHR1132:
SAMSHR1132_17070
MSSA476:
SAS1784
Mu3:
SAHV_1847
Mu50:
SAV1862
MW2:
MW1802
RF122:
SAB1795c
ST398:
SAPIG1955
T0131:
SAT0131_01984 (llm)
TCH60:
HMPREF0772_11282
TW20:
SATW20_18560
USA300_TCH1516:
USA300HOU_1857
VC40:
SAVC_08565
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKVVGLNRMREVETELQQRFSDLDFKFYKKASEIPESDLADLDILVGYDGGINEAFLRRC
N315 MKVVGLNRMREVETELQQRFSDLDFKFYKKASEIPESDLADLDILVGYDGGINEAFLQRC
NCTC8325 MKVVGLNRMREVETELQQRFSDLDFKFYKKASEIPESDLADLDILVGYDGGINEAFLRRC
Newman MKVVGLNRMREVETELQQRFSDLDFKFYKKASEIPESDLADLDILVGYDGGINEAFLRRC
USA300_FPR3757 MKVVGLNRMREVETELQQRFSDLDFKFYKKASEIPESDLADLDILVGYDGGINEAFLRRC
*********************************************************:**
COL PNLKWIAWFATGVNTLPLDYIADHGILLTNGKGVQAKQLSEYILAFILDDYKKMKLSYDN
N315 PNLKWIAWFATGVNTLPLDYIADHGILLTNGKGVQAKQLSEYILAFILDDYKKMKLSYDN
NCTC8325 PNLKWIAWFATGVNTLPLDYIADHGILLTNGKGVQAKQLSEYILAFILDDYKKMKLSYDN
Newman PNLKWIAWFATGVNTLPLDYIADHGILLTNGKGVQAKQLSEYILAFILDDYKKMKLSYDN
USA300_FPR3757 PNLKWIAWFATGVNTLPLDYIADHGILLTNGKGVQAKQLSEYILAFILDDYKKMKLSYDN
************************************************************
COL QRQHIYDSKITGKRLSGQTVLFLGTGAIATRTAKLAKAFNMNLIGLSKSGQNKDEFDEIY
N315 QRQHIYDSKITGKRLSGQTVLFLGTGAIATRTAKLAKAFNMNLIGLSKSGQNKDEFDEIY
NCTC8325 QRQHIYDSKITGKRLSGQTVLFLGTGAIATRTAKLAKAFNMNLIGLSKSGQNKDEFDEIY
Newman QRQHIYDSKITGKRLSGQTVLFLGTGAIATRTAKLAKAFNMNLIGLSKSGQNKDEFDEIY
USA300_FPR3757 QRQHIYDSKITGKRLSGQTVLFLGTGAIATRTAKLAKAFNMNLIGLSKSGQNKDEFDEIY
************************************************************
COL TIESLESTLPNADIIINALPETQETIHLLKKKHFELMKDEALFINIGRGSIVKEALLIEV
N315 TIESLESTLPNADIIINALPETQETIHLLKKKHFELMKDEALFINIGRGSIVKEALLIEV
NCTC8325 TIESLESTLPNADIIINALPETQETIHLLKKKHFELMKDEALFINIGRGSIVKEALLIEV
Newman TIESLESTLPNADIIINALPETQETIHLLKKKHFELMKDEALFINIGRGSIVKEALLIEV
USA300_FPR3757 TIESLESTLPNADIIINALPETQETIHLLKKKHFELMKDEALFINIGRGSIVKEALLIEV
************************************************************
COL LKSKVIRHAYLDVFENEPLKPNHELYELDNVTITAHITGNDYEAKYDLLDIFKNNLVNFL
N315 LKSKVIRHAYLDVFENEPLKPNHELYELENVTITAHITGNDYEAKYDLLDIFKNNLVNFL
NCTC8325 LKSKVIRHAYLDVFENEPLKPNHELYELDNVTITAHITGNDYEAKYDLLDIFKNNLVNFL
Newman LKSKVIRHAYLDVFENEPLKPNHELYELDNVTITAHITGNDYEAKYDLLDIFKNNLVNFL
USA300_FPR3757 LKSKVIRHAYLDVFENEPLKPNHELYELDNVTITAHITGNDYEAKYDLLDIFKNNLVNFL
****************************:*******************************
COL NKNGIIENEVDAKKGY
N315 NKNGLIENEVDAKKGY
NCTC8325 NKNGLIENEVDAKKGY
Newman NKNGLIENEVDAKKGY
USA300_FPR3757 NKNGLIENEVDAKKGY
****:***********