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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004803000
- symbol?: trnaQ
- synonym:
- description?: tRNA-Gln
- tRNA-Gln
- tRNA-His
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5009843..5009914
- synteny block?: BlockID0037330
- occurrence?: in 100% of 34 strains
trnaQ : tRNA-GlnUUG
Modifications: [1]
• None of the glutaminyl-tRNAs were identified in the modified nucleobase analysis in the above cited reference
Transfer RNA coding elements are organized in up to eleven loci in Staphylococcus aureus. Staphylococci encode up to two glutaminyl-tRNA sequences, all of which share the same UUG anticodon. This tRNA-GlnUUG1 is from Locus V; the other tRNA-Gln can be found elsewhere in Locus VII (tRNA-GlnUUG2) and as an isolated tRNA (tRNA-GlnUUG3). Please note that some additional modifications, such as pseudouridines (Ψ) are almost certainly present but not captured in the above cited reference.
⊟Orthologs[edit | edit source]
04-02981:
SA2981_tRNA32
08BA02176:
C248_1907 (trnaQ)
11819-97:
MS7_1869
6850:
RSAU_001722
71193:
ST398NM01_r038
ECT-R 2:
ECTR2_1707
ED133:
SAOV_1861c
ED98:
SAAV_1886
HO 5096 0412:
SAEMRSA15_tRNA0030
JH1:
SaurJH1_R0041
JH9:
SaurJH9_R0041
JKD6008:
SAA6008_t28
JKD6159:
SAA6159_t28
JSNZ:
JSNZ_001862
LGA251:
SARLGA251_t23
M013:
M013TW_1869
MRSA252:
SARt029
MSHR1132:
SAMSHR1132_t21
MSSA476:
SASt029
Mu3:
SAHV_t0030
Mu50:
SAVtRNA29
MW2:
MWtRNA29
RF122:
SAB_t28
ST398:
SAPIG1930
T0131:
SAT0131_t039
TCH60:
HMPREF0772_t10044
TW20:
SATW20_t280
USA300_TCH1516:
USA300HOU_t0029
VC40:
SAVC_t12523
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues:
- ↑ Laura Antoine, Philippe Wolff, Eric Westhof, Pascale Romby, Stefano Marzi
Mapping post-transcriptional modifications in Staphylococcus aureus tRNAs by nanoLC/MSMS.
Biochimie: 2019, 164;60-69
[PubMed:31295507] [WorldCat.org] [DOI] (I p)