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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005517000
- symbol?: trnaQ
- synonym:
- description?: tRNA-Gln
- strand?: -
- coordinates?: 5677906..5677981
- synteny block?: BlockID0042980
- occurrence?: in 100% of 34 strains
trnaQ : tRNA-GlnUUG
Modifications: [1]
• None of the glutaminyl-tRNAs were identified in the modified nucleobase analysis in the above cited reference
Transfer RNA coding elements are organized in up to eleven loci in Staphylococcus aureus. Staphylococci encode up to three glutaminyl-tRNA sequences, all of which share the same UUG anticodon. This tRNA-GlnUUG2 is from Locus VII; the other tRNA-Gln can be found elsewhere in Locus V (tRNA-GlnUUG1) and as an isolated tRNA (tRNA-GlnUUG3). Please note that some additional modifications, such as pseudouridines (Ψ) are almost certainly present but not captured in the above cited reference.
⊟Orthologs[edit | edit source]
04-02981:
SA2981_tRNA59
08BA02176:
C248_2194 (trnaQ)
11819-97:
MS7_2181
6850:
RSAU_002002
71193:
ST398NM01_r015
ECT-R 2:
ECTR2_2019
ED133:
SAOV_2205c
ED98:
SAAV_2220
HO 5096 0412:
SAEMRSA15_tRNA0057
JH1:
SaurJH1_R0074
JH9:
SaurJH9_R0074
JKD6008:
SAA6008_t58
JKD6159:
SAA6159_t53
JSNZ:
JSNZ_002126
LGA251:
SARLGA251_t57
M013:
M013TW_2124
MRSA252:
SARt056
MSHR1132:
SAMSHR1132_t48
MSSA476:
SASt056
Mu3:
SAHV_t0057
Mu50:
SAVtRNA56
MW2:
MWtRNA56
RF122:
SAB_t56
ST398:
SAPIG2221
T0131:
SAT0131_t016
TCH60:
HMPREF0772_t10017
TW20:
SATW20_t560
USA300_TCH1516:
USA300HOU_t0056
VC40:
SAVC_t12577
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues:
- ↑ Laura Antoine, Philippe Wolff, Eric Westhof, Pascale Romby, Stefano Marzi
Mapping post-transcriptional modifications in Staphylococcus aureus tRNAs by nanoLC/MSMS.
Biochimie: 2019, 164;60-69
[PubMed:31295507] [WorldCat.org] [DOI] (I p)