Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004758000
- symbol?: hemE
- synonym:
- description?: uroporphyrinogen decarboxylase
- uroporphyrinogen decarboxylase
- Uroporphyrinogen III decarboxylase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4972783..4973820
- synteny block?: BlockID0036900
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1790 (hemE)
08BA02176:
C248_1875 (hemE)
11819-97:
MS7_1839 (hemE)
6850:
RSAU_001693 (hemE)
71193:
ST398NM01_1899
ECT-R 2:
ECTR2_1676 (hemE)
ED133:
SAOV_1829 (hemE)
ED98:
SAAV_1852 (hemE)
HO 5096 0412:
SAEMRSA15_17380 (hemE)
JH1:
SaurJH1_1921 (hemE)
JH9:
SaurJH9_1887 (hemE)
JKD6008:
SAA6008_01791 (hemE)
JKD6159:
SAA6159_01762 (hemE)
LGA251:
SARLGA251_17170 (hemE)
M013:
M013TW_1840
MRSA252:
SAR1925 (hemE)
MSHR1132:
SAMSHR1132_16800
MSSA476:
SAS1755 (hemE)
Mu3:
SAHV_1819 (hemE)
Mu50:
SAV1834 (hemE)
MW2:
MW1774 (hemE)
RF122:
SAB1765c (hemE)
ST398:
SAPIG1899 (hemE)
T0131:
SAT0131_01953
TCH60:
HMPREF0772_11311 (hemE)
TW20:
SATW20_18280 (hemE)
USA300_TCH1516:
USA300HOU_1825 (hemE)
VC40:
SAVC_08400 (hemE)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLFDITHQPELCAYVTH
N315 MVHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLFDITHQPELCAYVTH
NCTC8325 MVHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLFDITHQPELCAYVTH
Newman MVHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLFDITHQPELCAYVTH
USA300_FPR3757 MVHNKNNTILKMIKGEETSHTPVWFMRQAGRSQPEYRKLKEKYSLFDITHQPELCAYVTH
************************************************************
COL LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV
N315 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV
NCTC8325 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV
Newman LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV
USA300_FPR3757 LPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPIKTIQDVEKLSQIDPERDV
************************************************************
COL PYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFALM
N315 PYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFALM
NCTC8325 PYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFALM
Newman PYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFALM
USA300_FPR3757 PYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSKNYNFTKAMMYRDEATWFALM
************************************************************
COL NHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKHDVPV
N315 NHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKHDVPV
NCTC8325 NHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKHDVPV
Newman NHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKHDVPV
USA300_FPR3757 NHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYRRYIKPHMIRLISEVKEKHDVPV
************************************************************
COL ILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNVIEE
N315 ILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNVIEE
NCTC8325 ILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNVIEE
Newman ILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNVIEE
USA300_FPR3757 ILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQLGVTKTLQGNLDPSILLAPWNVIEE
************************************************************
COL RLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTYTQR
N315 RLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTYTQR
NCTC8325 RLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTYTQR
Newman RLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTYTQR
USA300_FPR3757 RLKPILDQGMENGKHIFNLGHGVFPEVQPETLRKVSEFVHTYTQR
*********************************************