PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004307000
• symbol^?: dnaB
• synonym:
• description^?: helicase DnaB

  descriptions from strain specific annotations:

  • helicase DnaB
  • replication initiation and membrane attachment protein
  • chromosome replication initiation/membrane attachment protein
  • chromosome replication initiation and membrane attachment protein
  • Helicase loader DnaB
  • replication initiation and membrane attachment family protein
  • replication initiation and membrane attachment protein (DnaB) family protein
  • replicative DNA helicase
  • replicative DNA helicase DnaB
• strand^?: -
• coordinates^?: 4546010..4547433
• synteny block^?: BlockID0033310
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1732
N315:
SA1508 (dnaB)
NCTC8325:
SAOUHSC_01792
Newman:
NWMN_1578 (dnaB)
USA300_FPR3757:
SAUSA300_1631
04-02981:
SA2981_1644 (dnaB)
08BA02176:
C248_1727 (dnaB)
11819-97:
MS7_1692
6850:
RSAU_001543 (dnaB2)
71193:
ST398NM01_1739
ECT-R 2:
ECTR2_1525
ED133:
SAOV_1673
ED98:
SAAV_1675
HO 5096 0412:
SAEMRSA15_15950 (dnaB)
JH1:
SaurJH1_1776
JH9:
SaurJH9_1742
JKD6008:
SAA6008_01652 (dnaB)
JKD6159:
SAA6159_01609 (dnaB)
LGA251:
SARLGA251_15770 (dnaB)
M013:
M013TW_1698
MRSA252:
SAR1764 (dnaB)
MSHR1132:
SAMSHR1132_15120
MSSA476:
SAS1613
Mu3:
SAHV_1671 (dnaB)
Mu50:
SAV1685 (dnaB)
MW2:
MW1628 (dnaB)
RF122:
SAB1544c (dnaB)
ST398:
SAPIG1739
T0131:
SAT0131_01787
TCH60:
HMPREF0772_11466 (dnaB2)
TW20:
SATW20_16750 (dnaB)
USA300_TCH1516:
USA300HOU_1672 (dnaB2)
VC40:
SAVC_07630

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MGRQAFEFGLRPKDQFKVMQHFDLNTNHLEVLNRLYTPLIGTQAVGLYHFMTQFVKESHN
  N315            MGRQAFEFGLRPKDQFKVMQHFDLNTNHLEVLNRLYTPLIGTQAVGLYHFMTQFVKDSHN
  NCTC8325        MGRQAFEFGLRPKDQFKVMQHFDLNTNHLEVLNRLYTPLIGTQAVGLYHFMTQFVKESHN
  Newman          MGRQAFEFGLRPKDQFKVMQHFDLNTNHLEVLNRLYTPLIGTQAVGLYHFMTQFVKESHN
  USA300_FPR3757  MGRQAFEFGLRPKDQFKVMQHFDLNTNHLEVLNRLYTPLIGTQAVGLYHFMTQFVKESHN
                  ********************************************************:***
  
  COL             ETLILSHYIFMNELKINLLEFRQQMDLLEAIGLLKAFVKHDEQETQFVYQLIQPPSAHLF
  N315            ETLILSHYIFMNELKINLLEFRQQMDLLEAIGLLKAFVKHDEQETQFVYQLIQPPSAHLF
  NCTC8325        ETLILSHYIFMNELKINLLEFRQQMDLLEAIGLLKAFVKHDEQETQFVYQLIQPPSAHLF
  Newman          ETLILSHYIFMNELKINLLEFRQQMDLLEAIGLLKAFVKHDEQETQFVYQLIQPPSAHLF
  USA300_FPR3757  ETLILSHYIFMNELKINLLEFRQQMDLLEAIGLLKAFVKHDEQETQFVYQLIQPPSAHLF
                  ************************************************************
  
  COL             FNDPMLSIFLYSEVEHRRFHELKKYFEYQQIDLSEFKQVTRQFTDVFKVPSTKIDIDTSD
  N315            FNDPMLSIFLYSEVEHRRFHELKKYFEYQQIDLSEFKQVTRQFTDVFKVPSTKIDIDTSD
  NCTC8325        FNDPMLSIFLYSEVEHRRFHELKKYFEYQQIDLSEFKQVTRQFTDVFKVPSTKIDIDTSD
  Newman          FNDPMLSIFLYSEVEHRRFHELKKYFEYQQIDLSEFKQVTRQFTDVFKVPSTKIDIDTSD
  USA300_FPR3757  FNDPMLSIFLYSEVEHRRFHELKKYFEYQQIDLSEFKQVTRQFTDVFKVPSTKIDIDTSD
                  ************************************************************
  
  COL             IPINEPYQGIDLSNESFDFEMLRQMLGKHFISQDIVTKDAKRLITQLATLYGLTADGMKH
  N315            IPINEPYQGIDLSNESFDFEMLRQMLGKHFISQDIVTKDAKRLITQLATLYGLTADGMKH
  NCTC8325        IPINEPYQGIDLSNESFDFEMLRQMLGKHFISQDIVTKDAKRLITQLATLYGLTADGMKH
  Newman          IPINEPYQGIDLSNESFDFEMLRQMLGKHFISQDIVTKDAKRLITQLATLYGLTADGMKH
  USA300_FPR3757  IPINEPYQGIDLSNESFDFEMLRQMLGKHFISQDIVTKDAKRLITQLATLYGLTADGMKH
                  ************************************************************
  
  COL             VILNSITSGQQLSFEEMRKQARSYYLMEHENQMPKLQVKSPATSSSAGKSSEVNPKPQSD
  N315            VILNSITSGQQLSFEEMRKQARSYYLMEHENQMPKLQVKSPATSSSTGKSSEVNPKPQSD
  NCTC8325        VILNSITSGQQLSFEEMRKQARSYYLMEHENQMPKLQVKSPATSSSAGKSSEVNPKPQSD
  Newman          VILNSITSGQQLSFEEMRKQARSYYLMEHENQMPKLQVKSPATSSSAGKSSEVNPKPQSD
  USA300_FPR3757  VILNSITSGQQLSFEEMRKQARSYYLMEHENQMPKLQVKSPATSSSAGKSSEVNPKPQSD
                  **********************************************:*************
  
  COL             EWFELLEQTSPIDMLASWSESEPTISQKTMVEELIEREKMSFGVINILLQFVMLKEDMKL
  N315            EWFELLEQTSPIDMLASWSESEPTISQKTMVEELIEREKMSFGVINILLQFVMLKEDMKL
  NCTC8325        EWFELLEQTSPIDMLASWSESEPTISQKTMVEELIEREKMSFGVINILLQFVMLKEDMKL
  Newman          EWFELLEQTSPIDMLASWSESEPTISQKTMVEELIEREKMSFGVINILLQFVMLKEDMKL
  USA300_FPR3757  EWFELLEQTSPIDMLASWSESEPTISQKTMVEELIEREKMSFGVINILLQFVMLKEDMKL
                  ************************************************************
  
  COL             PKAYILEIASNWKKKGIKTAKEAYNYAKKVNQPKNEGSSGNYQKRGSYYGQRNRISKEKT
  N315            PKAYILEIASNWKKKGIKTAKEAYNYAKKVNQPKNEGSSGNYQKRGSYYGQRNRISKEKT
  NCTC8325        PKAYILEIASNWKKKGIKTAKEAYNYAKKVNQPKNEGSSGNYQKRGSYYGQRNRISKEKT
  Newman          PKAYILEIASNWKKKGIKTAKEAYNYAKKVNQPKNEGSSGNYQKRGSYYGQRNRISKEKT
  USA300_FPR3757  PKAYILEIASNWKKKGIKTAKEAYNYAKKVNQPKNEGSSGNYQKRGSYYGQRNRISKEKT
                  ************************************************************
  
  COL             PKWLENRDKPSEEDSAKDNSVDDQQLEQDRQAFLDKLSKKWEEDSQ
  N315            PKWLENRDKPSEEDSAKDNSVDDQQLEQDRQAFLDKLSKKWEEDSR
  NCTC8325        PKWLENRDKPSEEDSAKDNSVDDQQLEQDRQAFLDKLSKKWEEDSQ
  Newman          PKWLENRDKPSEEDSAKDNSVDDQQLEQDRQAFLDKLSKKWEEDSQ
  USA300_FPR3757  PKWLENRDKPSEEDSAKDNSVDDQQLEQDRQAFLDKLSKKWEEDSQ
                  *********************************************: