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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004299000
- symbol?: infC
- synonym:
- description?: translation initiation factor IF-3
- translation initiation factor IF-3
- protein translation initiation factor 3 (IF-3)
- Translation initiation factor 3
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4540047..4540565
- synteny block?: BlockID0033230
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1640 (infC)
08BA02176:
C248_1722 (infC)
11819-97:
MS7_1688 (infC)
6850:
RSAU_001539 (infC)
71193:
ST398NM01_1735
ECT-R 2:
ECTR2_1521 (infC)
ED133:
SAOV_1669
ED98:
SAAV_1668 (infC)
HO 5096 0412:
SAEMRSA15_15910 (infC)
JH1:
SaurJH1_1772 (infC)
JH9:
SaurJH9_1738 (infC)
JKD6008:
SAA6008_01648 (infC)
JKD6159:
SAA6159_01605 (infC)
LGA251:
SARLGA251_15730 (infC)
M013:
M013TW_1694
MRSA252:
SAR1760 (infC)
MSHR1132:
SAMSHR1132_15080
MSSA476:
SAS1609 (infC)
Mu3:
SAHV_1667 (infC)
Mu50:
SAV1680 (infC)
MW2:
MW1624 (infC)
RF122:
SAB1540c (infC)
ST398:
SAPIG1735 (infC)
T0131:
SAT0131_01783
TCH60:
HMPREF0772_11470 (infC)
TW20:
SATW20_16710 (infC)
USA300_TCH1516:
—
VC40:
SAVC_07610 (infC)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSTIAKDQTQINDKIRAKELRLIGQDGEQIGVKSKREALEMAERVDLDLVVVAPNAKPPV
N315 ---MAKDQTQINDKIRAKELRLIGQDGEQIGVKSKREALEMAERVDLDLVVVAPNAKPPV
NCTC8325 MSTIAKDQTQINDKIRAKELRLIGQDGEQIGVKSKREALEMAERVDLDLVVVAPNAKPPV
Newman MSTIAKDQTQINDKIRAKELRLIGQDGEQIGVKSKREALEMAERVDLDLVVVAPNAKPPV
USA300_FPR3757 MSTIAKDQTQINDKIRAKELRLIGQDGEQIGVKSKREALEMAERVDLDLVVVAPNAKPPV
:********************************************************
COL ARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTIEEHDFQTKLKNGRKFLTKGDKC
N315 ARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTIEEHDFQTKLKNGRKFLTKGDKC
NCTC8325 ARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTIEEHDFQTKLKNGRKFLTKGDKC
Newman ARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTIEEHDFQTKLKNGRKFLTKGDKC
USA300_FPR3757 ARIMDYGKFKFEQQKKEKEMKKKQKIINVKEIRLSPTIEEHDFQTKLKNGRKFLTKGDKC
************************************************************
COL KVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKPKMDGRQMFIMLAPTAEK
N315 KVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKPKMDGRQMFIMLAPTAEK
NCTC8325 KVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKPKMDGRQMFIMLAPTAEK
Newman KVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKPKMDGRQMFIMLAPTAEK
USA300_FPR3757 KVSIRFRGRAITHKEIGQRVLEKYADECKDIATVEQKPKMDGRQMFIMLAPTAEK
*******************************************************