Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004247000
- symbol?: ruvB
- synonym:
- description?: Holliday junction DNA helicase RuvB
- Holliday junction DNA helicase RuvB
- Holliday junction branch migration DNA helicase RuvB
- crossover junction ATP-dependent DNA helicase RuvB
- crossover junction endodeoxyribonuclease
- Holliday junction ATP-dependent DNA helicase RuvB
- Holliday junction DNA helicase subunit RuvB
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4494930..4495934
- synteny block?: BlockID0032750
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1599 (ruvB)
08BA02176:
C248_1684 (ruvB)
11819-97:
MS7_1656 (ruvB)
6850:
RSAU_001502 (ruvB)
71193:
ST398NM01_1704
ECT-R 2:
ECTR2_1489 (ruvB)
ED133:
SAOV_1638 (ruvB)
ED98:
SAAV_1634 (ruvB)
HO 5096 0412:
SAEMRSA15_15580 (ruvB)
JH1:
SaurJH1_1731 (ruvB)
JH9:
SaurJH9_1698 (ruvB)
JKD6008:
SAA6008_01610 (ruvB)
JKD6159:
SAA6159_01573 (ruvB)
LGA251:
SARLGA251_15430 (ruvB)
M013:
M013TW_1661
MRSA252:
SAR1721 (ruvB)
MSHR1132:
SAMSHR1132_14770
MSSA476:
SAS1577 (ruvB)
Mu3:
SAHV_1628 (ruvB)
Mu50:
SAV1641 (ruvB)
MW2:
MW1591 (ruvB)
RF122:
SAB1510c (ruvB)
ST398:
SAPIG1704 (ruvB)
T0131:
SAT0131_01741
TCH60:
HMPREF0772_11501 (ruvB)
TW20:
SATW20_16350 (ruvB)
USA300_TCH1516:
USA300HOU_1640 (ruvB)
VC40:
SAVC_07450 (ruvB)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNERMVDQSMHSEETDFELSLRPTRLRQYIGQNSIKSNLEVFIKAAKLRHEPLDHVLLFG
N315 MNERMVDQSMHSEETDFELSLRPTRLRQYIGQNSIKSNLEVFIKAAKLRHEPLDHVLLFG
NCTC8325 MNERMVDQSMHSEETDFELSLRPTRLRQYIGQNSIKSNLEVFIKAAKLRHEPLDHVLLFG
Newman MNERMVDQSMHSEETDFELSLRPTRLRQYIGQNSIKSNLEVFIKAAKLRHEPLDHVLLFG
USA300_FPR3757 MNERMVDQSMHSEETDFELSLRPTRLRQYIGQNSIKSNLEVFIKAAKLRHEPLDHVLLFG
************************************************************
COL PPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVV
N315 PPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVV
NCTC8325 PPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVV
Newman PPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVV
USA300_FPR3757 PPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILSGLQPGDVLFIDEIHRLSSVV
************************************************************
COL EEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLE
N315 EEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLE
NCTC8325 EEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLE
Newman EEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLE
USA300_FPR3757 EEVLYPAMEDFFLDIIIGKGDEARSIRIDLPPFTLVGATTRAGSLTGPLRDRFGVHLRLE
************************************************************
COL YYNESDLKEIIIRTAEVLGTGIDEESAIELAKRSRGTPRVANRLLKRVRDFQQVNEDEQI
N315 YYNESDLKEIIIRTAEVLGTGIDEESAIELAKRSRGTPRVANRLLKRVRDFQQVNEDEQI
NCTC8325 YYNESDLKEIIIRTAEVLGTGIDEESAIELAKRSRGTPRVANRLLKRVRDFQQVNEDEQI
Newman YYNESDLKEIIIRTAEVLGTGIDEESAIELAKRSRGTPRVANRLLKRVRDFQQVNEDEQI
USA300_FPR3757 YYNESDLKEIIIRTAEVLGTGIDEESAIELAKRSRGTPRVANRLLKRVRDFQQVNEDEQI
************************************************************
COL YIETTKHALGLLQVDQHGLDYIDHKMMNCIIKQYNGGPVGLDTIAVTIGEERITIEDVYE
N315 YIETTKHALGLLQVDQHGLDYIDHKMMNCIIKQYNGGPVGLDTIAVTIGEERITIEDVYE
NCTC8325 YIETTKHALGLLQVDQHGLDYIDHKMMNCIIKQYNGGPVGLDTIAVTIGEERITIEDVYE
Newman YIETTKHALGLLQVDQHGLDYIDHKMMNCIIKQYNGGPVGLDTIAVTIGEERITIEDVYE
USA300_FPR3757 YIETTKHALGLLQVDQHGLDYIDHKMMNCIIKQYNGGPVGLDTIAVTIGEERITIEDVYE
************************************************************
COL PFLIQKGFLERTPRGRKATPLAYEHFAKSNEERE
N315 PFLIQKGFLERTPRGRKATPLAYEHFAKSNEERG
NCTC8325 PFLIQKGFLERTPRGRKATPLAYEHFAKSNEERE
Newman PFLIQKGFLERTPRGRKATPLAYEHFAKSNEERE
USA300_FPR3757 PFLIQKGFLERTPRGRKATPLAYEHFAKSNEERE
*********************************