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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004162000
- symbol?: dnaJ
- synonym:
- description?: molecular chaperone DnaJ
- molecular chaperone DnaJ
- chaperone protein DnaJ
- DnaJ protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4427183..4428322
- synteny block?: BlockID0031920
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1537 (dnaJ)
08BA02176:
C248_1622 (dnaJ)
11819-97:
MS7_1596 (dnaJ)
6850:
RSAU_001444 (dnaJ)
71193:
ST398NM01_1645
ECT-R 2:
ECTR2_1429 (dnaJ)
ED133:
SAOV_1579
ED98:
SAAV_1571 (dnaJ)
HO 5096 0412:
SAEMRSA15_14990 (dnaJ)
JH1:
SaurJH1_1671
JH9:
SaurJH9_1637
JKD6008:
SAA6008_01549 (dnaJ)
JKD6159:
SAA6159_01514 (dnaJ)
LGA251:
SARLGA251_14850 (dnaJ)
M013:
M013TW_1594
MRSA252:
SAR1656 (dnaJ)
MSHR1132:
SAMSHR1132_14190
MSSA476:
SAS1517
Mu3:
SAHV_1566 (dnaJ)
Mu50:
SAV1579 (dnaJ)
MW2:
MW1531 (dnaJ)
RF122:
SAB1451c (dnaJ)
ST398:
SAPIG1645 (dnaJ)
T0131:
SAT0131_01675
TCH60:
HMPREF0772_11561 (dnaJ)
TW20:
SATW20_15750 (dnaJ)
USA300_TCH1516:
USA300HOU_1580 (dnaJ)
VC40:
SAVC_07145
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDN
N315 MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDN
NCTC8325 MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDN
Newman MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDN
USA300_FPR3757 MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDN
************************************************************
COL KRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD
N315 KRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD
NCTC8325 KRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD
Newman KRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD
USA300_FPR3757 KRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGD
************************************************************
COL DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQN
N315 DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQN
NCTC8325 DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQN
Newman DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQN
USA300_FPR3757 DLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQN
************************************************************
COL TILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKTVKLEVKVPEGVDNEQQIRLAGE
N315 TILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKTVKLEVKVPEGVDNEQQIRLAGE
NCTC8325 TILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKTVKLEVKVPEGVDNEQQIRLAGE
Newman TILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKTVKLEVKVPEGVDNEQQIRLAGE
USA300_FPR3757 TILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKTVKLEVKVPEGVDNEQQIRLAGE
************************************************************
COL GSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKLNVSFPQAALGDEIKIPTLNNEVML
N315 GSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKLNVSFPQAALGDEIKIPTLNNEVML
NCTC8325 GSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKLNVSFPQAALGDEIKIPTLNNEVML
Newman GSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKLNVSFPQAALGDEIKIPTLNNEVML
USA300_FPR3757 GSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKLNVSFPQAALGDEIKIPTLNNEVML
************************************************************
COL TIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDIKVVTPTKLTDRQKELMKEFAQLNGEE
N315 TIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDIKVVTPTKLTDRQKELMKEFAQLNGEE
NCTC8325 TIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDIKVVTPTKLTDRQKELMKEFAQLNGEE
Newman TIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDIKVVTPTKLTDRQKELMKEFAQLNGEE
USA300_FPR3757 TIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDIKVVTPTKLTDRQKELMKEFAQLNGEE
************************************************************
COL INEQPSNFKDRAKRFFKGE
N315 INEQPSNFKDRAKRFFKGE
NCTC8325 INEQPSNFKDRAKRFFKGE
Newman INEQPSNFKDRAKRFFKGE
USA300_FPR3757 INEQPSNFKDRAKRFFKGE
*******************