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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004146000
- symbol?: glyS
- synonym:
- description?: glycyl-tRNA synthetase
- glycyl-tRNA synthetase
- glycine--tRNA ligase
- glycyl-tRNA synthetase subunit beta
- putative glycyl-tRNA synthetase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4415169..4416560
- synteny block?: BlockID0031760
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1523 (glyS)
08BA02176:
C248_1608
11819-97:
MS7_1582 (glyS)
6850:
RSAU_001430 (glyS)
71193:
ST398NM01_1630
ECT-R 2:
ECTR2_1415 (glyS)
ED133:
SAOV_1565 (glyS)
ED98:
SAAV_1557 (glyS)
HO 5096 0412:
SAEMRSA15_14850
JH1:
SaurJH1_1657
JH9:
SaurJH9_1623
JKD6008:
SAA6008_01534 (glyS)
JKD6159:
SAA6159_01500 (glyS)
LGA251:
SARLGA251_14710
M013:
M013TW_1580
MRSA252:
SAR1642
MSHR1132:
SAMSHR1132_14050
MSSA476:
SAS1503
Mu3:
SAHV_1552 (glyS)
Mu50:
SAV1565 (glyS)
MW2:
MW1517 (glyS)
RF122:
SAB1437 (glyS)
ST398:
SAPIG1630 (glyS)
T0131:
SAT0131_01660
TCH60:
HMPREF0772_11575 (glyS)
TW20:
SATW20_15610
USA300_TCH1516:
USA300HOU_1566 (glyS)
VC40:
SAVC_07075
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAKDMDTIVSLAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNVKKAWWQKFITQSPFN
N315 MAKDMDTIVSLAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNVKKAWWQKFITQSPFN
NCTC8325 MAKDMDTIVSLAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNVKKAWWQKFITQSPFN
Newman MAKDMDTIVSLAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNVKKAWWQKFITQSPFN
USA300_FPR3757 MAKDMDTIVSLAKHRGFVFPGSDIYGGLSNTWDYGPLGVELKNNVKKAWWQKFITQSPFN
************************************************************
COL VGIDAAILMNPKVWEASGHLNNFNDPMIDNKDSKIRYRADKLIEDYMQDVKGDENFIADG
N315 VGIDAAILMNPKVWEASGHLNNFNDPMIDNKDSKIRYRADKLIEDYMQDVKGDENFIADG
NCTC8325 VGIDAAILMNPKVWEASGHLNNFNDPMIDNKDSKIRYRADKLIEDYMQDVKGDENFIADG
Newman VGIDAAILMNPKVWEASGHLNNFNDPMIDNKDSKIRYRADKLIEDYMQDVKGDENFIADG
USA300_FPR3757 VGIDAAILMNPKVWEASGHLNNFNDPMIDNKDSKIRYRADKLIEDYMQDVKGDENFIADG
************************************************************
COL LSFEQMKKIIDDEGIVCPVSKTANWTEIRQFNLMFKTFQGVTEDSTNEIFLRPETAQGIF
N315 LSFEQMKKIIDDEGIVCPVSKTANWTEIRQFNLMFKTFQGVTEDSTNEIFLRPETAQGIF
NCTC8325 LSFEQMKKIIDDEGIVCPVSKTANWTEIRQFNLMFKTFQGVTEDSTNEIFLRPETAQGIF
Newman LSFEQMKKIIDDEGIVCPVSKTANWTEIRQFNLMFKTFQGVTEDSTNEIFLRPETAQGIF
USA300_FPR3757 LSFEQMKKIIDDEGIVCPVSKTANWTEIRQFNLMFKTFQGVTEDSTNEIFLRPETAQGIF
************************************************************
COL VNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKPGEEIEWQN
N315 VNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKPGEEIEWQN
NCTC8325 VNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKPGEEIEWQN
Newman VNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKPGEEIEWQN
USA300_FPR3757 VNYKNVQRSMRKKLPFGIGQIGKSFRNEITPGNFIFRTREFEQMELEFFCKPGEEIEWQN
************************************************************
COL YWKTFASDWLTSLNMSSENMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDF
N315 YWKTFASDWLTSLNMSSENMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDF
NCTC8325 YWKTFASDWLTSLNMSSENMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDF
Newman YWKTFASDWLTSLNMSSENMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDF
USA300_FPR3757 YWKTFASDWLTSLNMSSENMRLRDHDEDELSHYSNATTDIEYKFPFGWGELWGIASRTDF
************************************************************
COL DLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDART
N315 DLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDART
NCTC8325 DLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDART
Newman DLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDART
USA300_FPR3757 DLRKHAEHSGEDFRYHDPETNEKYIPYCIEPSLGADRVTLAFLCDAYDEEGVEGSKDART
************************************************************
COL VLHFHPALAPYKAAILPLSKKLSGEAIKIFEQLSSKFSIDFDESQSIGKRYRRQDEIGTP
N315 VLHFHPALAPYKAAILPLSKKLSGEAIKIFEQLSSKFSIDFDESQSIGKRYRRQDEIGTP
NCTC8325 VLHFHPALAPYKAAILPLSKKLSGEAIKIFEQLSSKFSIDFDESQSIGKRYRRQDEIGTP
Newman VLHFHPALAPYKAAILPLSKKLSGEAIKIFEQLSSKFSIDFDESQSIGKRYRRQDEIGTP
USA300_FPR3757 VLHFHPALAPYKAAILPLSKKLSGEAIKIFEQLSSKFSIDFDESQSIGKRYRRQDEIGTP
************************************************************
COL YCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKTKF
N315 YCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKTKF
NCTC8325 YCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKTKF
Newman YCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKTKF
USA300_FPR3757 YCVTFDFDSLEDNQVTVRDRDSMEQVRMPISELEAFLTEKTKF
*******************************************