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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004126000
- symbol?: glk
- synonym:
- description?: glucokinase
- glucokinase
- ROK family glucokinase
- glucokinase (Glucose kinase)
- putative glucokinase, ROK family
- ROK family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4396947..4397933
- synteny block?: BlockID0031560
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1505 (glcK)
08BA02176:
C248_1590 (glkA)
11819-97:
MS7_1564
6850:
RSAU_001412 (glkA)
71193:
ST398NM01_1612
ECT-R 2:
ECTR2_1398
ED133:
SAOV_1547
ED98:
SAAV_1539 (glk)
HO 5096 0412:
SAEMRSA15_14670 (glkA)
JH1:
SaurJH1_1639
JH9:
SaurJH9_1605
JKD6008:
SAA6008_01517 (glcK)
JKD6159:
SAA6159_01482 (glcK)
LGA251:
SARLGA251_14530 (glkA)
M013:
M013TW_1562
MRSA252:
SAR1624 (glkA)
MSHR1132:
SAMSHR1132_13880
MSSA476:
SAS1485
Mu3:
SAHV_1534 (glcK)
Mu50:
SAV1547 (glcK)
MW2:
MW1499 (glcK)
RF122:
SAB1419c (glkA)
ST398:
SAPIG1612
T0131:
SAT0131_01641
TCH60:
HMPREF0772_11594 (glk)
TW20:
SATW20_15430 (glkA)
USA300_TCH1516:
USA300HOU_1549 (glcK)
VC40:
SAVC_06980
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKIILAADVGGTTCKLGIFTPELEQLHKWSIHTDTSDSTGYTLLKGIYDSFVEKVNENN
N315 MTKIILAADVGGTTCKLGIFTPELEQLHKWSIHTDTSDSTGYTLLKGIYDSFVEKVNENN
NCTC8325 MTKIILAADVGGTTCKLGIFTPELEQLHKWSIHTDTSDSTGYTLLKGIYDSFVEKVNENN
Newman MTKIILAADVGGTTCKLGIFTPELEQLHKWSIHTDTSDSTGYTLLKGIYDSFVEKVNENN
USA300_FPR3757 MTKIILAADVGGTTCKLGIFTPELEQLHKWSIHTDTSDSTGYTLLKGIYDSFVEKVNENN
************************************************************
COL YNFSNVLGVGIGVPGPVDFEKGTVNGAVNLYWPEKVNVREIFEQFVDCPVYVDNDANIAA
N315 YNFSNVLGVGIGVPGPVDFEKGTVNGAVNLYWPEKVNVREIFEQFVDCPVYVDNDANIAA
NCTC8325 YNFSNVLGVGIGVPGPVDFEKGTVNGAVNLYWPEKVNVREIFEQFVDCPVYVDNDANIAA
Newman YNFSNVLGVGIGVPGPVDFEKGTVNGAVNLYWPEKVNVREIFEQFVDCPVYVDNDANIAA
USA300_FPR3757 YNFSNVLGVGIGVPGPVDFEKGTVNGAVNLYWPEKVNVREIFEQFVDCPVYVDNDANIAA
************************************************************
COL LGEKHKGAGEGADDVVAITLGTGLGGGIISNGEIVHGHNGSGAEIGHFRADFDQRFKCNC
N315 LGEKHKGAGEGADDVVAITLGTGLGGGIISNGEIVHGHNGSGAEIGHFRADFDQRFKCNC
NCTC8325 LGEKHKGAGEGADDVVAITLGTGLGGGIISNGEIVHGHNGSGAEIGHFRADFDQRFKCNC
Newman LGEKHKGAGEGADDVVAITLGTGLGGGIISNGEIVHGHNGSGAEIGHFRADFDQRFKCNC
USA300_FPR3757 LGEKHKGAGEGADDVVAITLGTGLGGGIISNGEIVHGHNGSGAEIGHFRADFDQRFKCNC
************************************************************
COL GRSGCIETVASATGVVNLVNFYYPKLTFRSSILELIKENKVTAKAVFDAAKAGDQFCIFI
N315 GRSGCIETVASATGVVNLINFYYPKLTFRSSILELIKENKVTAKAVFDAAKAGDQFCIFI
NCTC8325 GRSGCIETVASATGVVNLVNFYYPKLTFRSSILELIKENKVTAKAVFDAAKAGDQFCIFI
Newman GRSGCIETVASATGVVNLVNFYYPKLTFRSSILELIKENKVTAKAVFDAAKAGDQFCIFI
USA300_FPR3757 GRSGCIETVASATGVVNLVNFYYPKLTFRSSILELIKENKVTAKAVFDAAKAGDQFCIFI
******************:*****************************************
COL TEKVANYIGYLCSIISVTSNPKYIVLGGGMSTAGPILIENIKTEYHNLTFAPAQFETEIV
N315 TEKVANYIGYLCSIISVTSNPKYIVLGGGMSTAGPILIENIKTEYHNLTFAPAQFETEIV
NCTC8325 TEKVANYIGYLCSIISVTSNPKYIVLGGGMSTAGPILIENIKTEYHNLTFAPAQFETEIV
Newman TEKVANYIGYLCSIISVTSNPKYIVLGGGMSTAGPILIENIKTEYHNLTFAPAQFETEIV
USA300_FPR3757 TEKVANYIGYLCSIISVTSNPKYIVLGGGMSTAGPILIENIKTEYHNLTFAPAQFETEIV
************************************************************
COL QAKLGNDAGITGAAGLIKTYVLDKEGVK
N315 QAKLGNDAGITGAAGLIKTYVLDKEGVK
NCTC8325 QAKLGNDAGITGAAGLIKTYVLDKEGVK
Newman QAKLGNDAGITGAAGLIKTYVLDKEGVK
USA300_FPR3757 QAKLGNDAGITGAAGLIKTYVLDKEGVK
****************************