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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004123000
- symbol?: comGA
- synonym:
- description?: type II/IV secretion system protein
- type II/IV secretion system protein
- competence protein comGA
- competence protein comGA, putative
- competence protein ComGA-like protein
- competence type IV pilus ATPase ComGA
- putative competence protein ComGA
- Late competence protein ComGA, access of DNA to ComEA
- ComG operon protein 1
- comG operon protein 1. domain protein
- late competence protein, ComGA
- late competence protein comGA
- putative type II secretion system protein
- type II/IV secretion system family protein
- type II secretion system protein E
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4394972..4395904
- synteny block?: BlockID0031530
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1502 (comGA)
08BA02176:
C248_1587
11819-97:
MS7_1561
6850:
RSAU_001409 (comGA)
71193:
ST398NM01_1609
ECT-R 2:
ECTR2_1395
ED133:
SAOV_1544
ED98:
SAAV_1536
HO 5096 0412:
SAEMRSA15_14640
JH1:
SaurJH1_1636
JH9:
SaurJH9_1602
JKD6008:
SAA6008_01514
JKD6159:
SAA6159_01479
LGA251:
SARLGA251_14500
M013:
M013TW_1559
MRSA252:
SAR1621
MSHR1132:
SAMSHR1132_13850
MSSA476:
SAS1482
Mu3:
SAHV_1531
Mu50:
SAV1544
MW2:
MW1496
RF122:
SAB1416c
ST398:
SAPIG1609
T0131:
SAT0131_01638
TCH60:
HMPREF0772_11597 (comGA)
TW20:
SATW20_15400
USA300_TCH1516:
USA300HOU_1546
VC40:
SAVC_06965
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQ
N315 MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQ
NCTC8325 MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQ
Newman MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQ
USA300_FPR3757 MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLVYMKFQ
************************************************************
COL AGLDVSTQQVAQSGRYSYLFNKIYFLRISTLPLSLGQESCVIRIVPQFFQPQKSTYKFND
N315 AGLDVSTQQVAQSGRYSYHFNKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFND
NCTC8325 AGLDVSTQQVAQSGRYSYLFNKIYFLRISTLPLSLGQESCVIRIVPQFFQPQKSTYKFND
Newman AGLDVSTQQVAQSGRYSYLFNKIYFLRISTLPLSLGQESCVIRIVPQFFQPQKSTYKFND
USA300_FPR3757 AGLDVSTQQVAQSGRYSYLFNKIYFLRISTLPLSLGQESCVIRIVPQFFQPQKSTYKFND
****************** ******************************* *********
COL FKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLNVISIEDPVEMQIPGIVQINV
N315 FKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLNVISIEDPVEMQIPGIVQINV
NCTC8325 FKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLNVISIEDPVEMQIPGIVQINV
Newman FKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLNVISIEDPVEMQIPGIVQINV
USA300_FPR3757 FKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLNVISIEDPVEMQIPGIVQINV
************************************************************
COL NDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
N315 NDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
NCTC8325 NDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
Newman NDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
USA300_FPR3757 NDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
************************************************************
COL LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFK
N315 LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFK
NCTC8325 LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFK
Newman LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFK
USA300_FPR3757 LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHNHSLPSSFK
************************************************************
COL NLEDKLDDMTKAGVICETTMHKYI
N315 NLEDKLDDMTKAGVICETTMDKYI
NCTC8325 NLEDKLDDMTKAGVICETTMHKYI
Newman NLEDKLDDMTKAGVICETTMHKYI
USA300_FPR3757 NLEDKLDDMTKAGVICETTMHKYI
********************.***