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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004114000
- symbol?: gcvT
- synonym:
- description?: glycine cleavage system aminomethyltransferase T
- glycine cleavage system aminomethyltransferase T
- aminomethyltransferase
- glycine cleavage system aminomethyltransferase GcvT
- Aminomethyltransferase (glycine cleavage system T protein)
- putative aminomethyltransferase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4390417..4391508
- synteny block?: BlockID0031440
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1495
08BA02176:
C248_1579 (gcvT)
11819-97:
MS7_1554 (gcvT)
6850:
RSAU_001403 (gcvT)
71193:
ST398NM01_1602
ECT-R 2:
ECTR2_1388 (gcvT)
ED133:
SAOV_1537 (gcvT)
ED98:
SAAV_1529 (gcvT)
HO 5096 0412:
SAEMRSA15_14570 (gcvT)
JH1:
SaurJH1_1628 (gcvT)
JH9:
SaurJH9_1595 (gcvT)
JKD6008:
SAA6008_01506 (gcvT)
JKD6159:
SAA6159_01472 (gcvT)
LGA251:
SARLGA251_14430 (gcvT)
M013:
M013TW_1552
MRSA252:
SAR1614 (gcvT)
MSHR1132:
SAMSHR1132_13770
MSSA476:
SAS1475 (gcvT)
Mu3:
SAHV_1524 (gcvT)
Mu50:
SAV1537 (gcvT)
MW2:
MW1489 (gcvT)
RF122:
SAB1409c (gcvT)
ST398:
SAPIG1602 (gcvT)
T0131:
SAT0131_01630
TCH60:
HMPREF0772_11604 (gcvT)
TW20:
SATW20_15330 (gcvT)
USA300_TCH1516:
USA300HOU_1538 (gcvT)
VC40:
SAVC_06930 (gcvT)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFSSIKEEHNAVRYEIGLFDVSHMGEIEV
N315 MSSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFSSIKEEHNAVRYEIGLFDVSHMGEIEV
NCTC8325 MSSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFSSIKEEHNAVRYEIGLFDVSHMGEIEV
Newman MSSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFSSIKEEHNAVRYEIGLFDVSHMGEIEV
USA300_FPR3757 MSSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFSSIKEEHNAVRYEIGLFDVSHMGEIEV
************************************************************
COL TGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANT
N315 TGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANT
NCTC8325 TGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANT
Newman TGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANT
USA300_FPR3757 TGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANT
************************************************************
COL EKDFNWILKHKEKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVK
N315 EKDFNWILKHKEKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVK
NCTC8325 EKDFNWILKHKEKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVK
Newman EKDFNWILKHKEKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVK
USA300_FPR3757 EKDFNWILKHKEKFDVEVQNVSNQYGQLAIQGPKARDLINQLVDEDVTEMKMFEFKQGVK
************************************************************
COL LFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDTLRLEAGLPLH
N315 LFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDTLRLEAGLPLH
NCTC8325 LFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDTLRLEAGLPLH
Newman LFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDTLRLEAGLPLH
USA300_FPR3757 LFGANVILSQSGYTGEDGFEIYCNIDDTEKIWDGLLEYNVMPCGLGARDTLRLEAGLPLH
************************************************************
COL GQDLTESITPYEGGIAFASKPLIDADFIGKSVLKDQKENGAPRRTVGLELLEKGIARTGY
N315 GQDLTESITPYEGGIAFASKPLIDADFIGKSVLKDQKENGAPRRTVGLELLEKGIARTGY
NCTC8325 GQDLTESITPYEGGIAFASKPLIDADFIGKSVLKDQKENGAPRRTVGLELLEKGIARTGY
Newman GQDLTESITPYEGGIAFASKPLIDADFIGKSVLKDQKENGAPRRTVGLELLEKGIARTGY
USA300_FPR3757 GQDLTESITPYEGGIAFASKPLIDADFIGKSVLKDQKENGAPRRTVGLELLEKGIARTGY
************************************************************
COL EVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELLVQVRKRQLKAKIVKKNQ
N315 EVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELLVQVRKRQLKAKIVKKNQ
NCTC8325 EVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELLVQVRKRQLKAKIVKKNQ
Newman EVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELLVQVRKRQLKAKIVKKNQ
USA300_FPR3757 EVMDLDGNIIGEVTSGTQSPSSGKSIALAMIKRDEFEMGRELLVQVRKRQLKAKIVKKNQ
************************************************************
COL IDK
N315 IDK
NCTC8325 IDK
Newman IDK
USA300_FPR3757 IDK
***