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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004106000
- symbol?: efp
- synonym:
- description?: elongation factor P
- elongation factor P
- translation elongation factor P
- protein translation elongation factor P (EF-P)
- putative elongation factor P
- translation elongation factor EF-P
- Translation initiation factor 5A
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4383037..4383594
- synteny block?: BlockID0031360
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1487
08BA02176:
C248_1571 (efp)
11819-97:
MS7_1546 (efp)
6850:
RSAU_001395 (efp)
71193:
ST398NM01_1594
ECT-R 2:
ECTR2_1380 (efp)
ED133:
SAOV_1529 (efp)
ED98:
SAAV_1521 (efp)
HO 5096 0412:
SAEMRSA15_14490 (efp)
JH1:
SaurJH1_1620
JH9:
SaurJH9_1587
JKD6008:
SAA6008_01498 (efp)
JKD6159:
SAA6159_01464 (efp)
LGA251:
SARLGA251_14350 (efp)
M013:
M013TW_1544
MRSA252:
SAR1606 (efp)
MSHR1132:
SAMSHR1132_13690
MSSA476:
SAS1467
Mu3:
SAHV_1516
Mu50:
SAV1528
MW2:
MW1481
RF122:
SAB1401c (efp)
ST398:
SAPIG1594 (efp)
T0131:
SAT0131_01622 (dnaX)
TCH60:
HMPREF0772_11612 (efp)
TW20:
SATW20_15250 (efp)
USA300_TCH1516:
USA300HOU_1530 (efp)
VC40:
SAVC_06890
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MISVNDFKTGLTISVDNAIWKVIDFQHVKPGKGSAFVRSKLRNLRTGAIQEKTFRAGEKV
N315 MISVNDFKTGLTISVDNAIWKVIDFQHVKPGKGSAFVRSKLRNLRTGAIQEKTFRAGEKV
NCTC8325 MISVNDFKTGLTISVDNAIWKVIDFQHVKPGKGSAFVRSKLRNLRTGAIQEKTFRAGEKV
Newman MISVNDFKTGLTISVDNAIWKVIDFQHVKPGKGSAFVRSKLRNLRTGAIQEKTFRAGEKV
USA300_FPR3757 MISVNDFKTGLTISVDNAIWKVIDFQHVKPGKGSAFVRSKLRNLRTGAIQEKTFRAGEKV
************************************************************
COL EPAMIENRRMQYLYADGDNHVFMDNESFEQTELSSDYLKEELNYLKEGMEVQIQTYEGET
N315 EPAMIENRRMQYLYADGDNHVFMDNESFEQTELSSDYLKEELNYLKEGMEVQIQTYEGET
NCTC8325 EPAMIENRRMQYLYADGDNHVFMDNESFEQTELSSDYLKEELNYLKEGMEVQIQTYEGET
Newman EPAMIENRRMQYLYADGDNHVFMDNESFEQTELSSDYLKEELNYLKEGMEVQIQTYEGET
USA300_FPR3757 EPAMIENRRMQYLYADGDNHVFMDNESFEQTELSSDYLKEELNYLKEGMEVQIQTYEGET
************************************************************
COL IGVELPKTVELTVTETEPGIKGDTATGATKSATVETGYTLNVPLFVNEGDVLIINTGDGS
N315 IGVELPKTVELTVTETEPGIKGDTATGATKSATVETGYTLNVPLFVNEGDVLIINTGDGS
NCTC8325 IGVELPKTVELTVTETEPGIKGDTATGATKSATVETGYTLNVPLFVNEGDVLIINTGDGS
Newman IGVELPKTVELTVTETEPGIKGDTATGATKSATVETGYTLNVPLFVNEGDVLIINTGDGS
USA300_FPR3757 IGVELPKTVELTVTETEPGIKGDTATGATKSATVETGYTLNVPLFVNEGDVLIINTGDGS
************************************************************
COL YISRG
N315 YISRG
NCTC8325 YISRG
Newman YISRG
USA300_FPR3757 YISRG
*****