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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004079000
- symbol?: nusB
- synonym:
- description?: transcription antitermination protein NusB
- transcription antitermination protein NusB
- N utilization substance protein B
- transcription antitermination factor NusB
- Transcription termination protein NusB
- N utilization substance protein B -like protein
- putative N utilization substance protein B
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4361033..4361432
- synteny block?: BlockID0031110
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1483 (nusB)
08BA02176:
C248_1567
11819-97:
MS7_1542 (nusB)
6850:
RSAU_001391 (nusB)
71193:
ST398NM01_1590
ECT-R 2:
ECTR2_1376 (nusB)
ED133:
SAOV_1525 (nusB)
ED98:
SAAV_1517 (nusB)
HO 5096 0412:
SAEMRSA15_14450
JH1:
SaurJH1_1616 (nusB)
JH9:
SaurJH9_1583 (nusB)
JKD6008:
SAA6008_01494 (nusB)
JKD6159:
SAA6159_01460 (nusB)
LGA251:
SARLGA251_14310
M013:
M013TW_1540
MRSA252:
SAR1602 (nusB)
MSHR1132:
SAMSHR1132_13650
MSSA476:
SAS1463 (nusB)
Mu3:
SAHV_1512 (nusB)
Mu50:
SAV1524 (nusB)
MW2:
MW1477 (nusB)
RF122:
SAB1397c (nusB)
ST398:
SAPIG1590 (nusB)
T0131:
SAT0131_01618
TCH60:
HMPREF0772_11616 (nusB)
TW20:
SATW20_15210
USA300_TCH1516:
USA300HOU_1526 (nusB)
VC40:
SAVC_06870 (nusB)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLD
N315 MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLD
NCTC8325 MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLD
Newman MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKDHEPVLD
USA300_FPR3757 MSRKESRVQAFQTLFQLEMKDSDLTINEAISFIKDDNPDLDFEFIHWLVSGVKGHEPVLD
*****************************************************.******
COL ETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFI
N315 ETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFI
NCTC8325 ETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFI
Newman ETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFI
USA300_FPR3757 ETISPYLKDWTIARLLKTDRIILRMATYEILHSDTPAKVVMNEAVELTKQFSDDDHYKFI
************************************************************
COL NGVLSNIKK
N315 NGVLSNIKK
NCTC8325 NGVLSNIKK
Newman NGVLSNIKK
USA300_FPR3757 NGVLSNIKK
*********