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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004076000
- symbol?: ispA
- synonym:
- description?: geranyltranstransferase
- geranyltranstransferase
- geranyltranstransferase, putative
- polyprenyl synthetase family protein
- Geranyltranstransferase (farnesyldiphosphate synthase)
- dimethylallyltransferase
- geranyltranstransferase (Farnesyl-diphosphate synthase)(FPP synthase)
- geranyltranstransferase-like protein
- ispA protein
- polyprenyl synthetase
- putative geranyltranstransferase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4358607..4359473
- synteny block?: BlockID0031080
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1480 (ispA)
08BA02176:
C248_1564
11819-97:
MS7_1539 (ispA)
6850:
RSAU_001388 (ispA)
71193:
ST398NM01_1587
ECT-R 2:
ECTR2_1373
ED133:
SAOV_1522 (ispA)
ED98:
SAAV_1514 (ispA)
HO 5096 0412:
SAEMRSA15_14420
JH1:
SaurJH1_1613
JH9:
SaurJH9_1580
JKD6008:
SAA6008_01491 (ispA)
JKD6159:
SAA6159_01457 (ispA)
LGA251:
SARLGA251_14280
M013:
M013TW_1537
MRSA252:
SAR1599
MSHR1132:
SAMSHR1132_13620
MSSA476:
SAS1460
Mu3:
SAHV_1509 (ispA)
Mu50:
SAV1521 (ispA)
MW2:
MW1474 (ispA)
RF122:
SAB1394c
ST398:
SAPIG1587
T0131:
SAT0131_01615 (gltC)
TCH60:
HMPREF0772_11619 (ispA)
TW20:
SATW20_15180
USA300_TCH1516:
USA300HOU_1523 (ispA)
VC40:
SAVC_06855
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTE
N315 MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTE
NCTC8325 MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTE
Newman MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTE
USA300_FPR3757 MTNLPMNKLIDEVNNELSVAINKSVMDTQLEESMLYSLNAGGKRIRPVLLLLTLDSLNTE
************************************************************
COL YELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAF
N315 YELGVKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAF
NCTC8325 YELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAF
Newman YELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAF
USA300_FPR3757 YELGMKSAIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKVYGEWTAILAGDALLTKAF
****:*******************************************************
COL ELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGA
N315 ELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGA
NCTC8325 ELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGA
Newman ELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGA
USA300_FPR3757 ELISSDDRLTDEVKIKVLQRLSIASGHVGMVGGQMLDMQSEGQPIDLETLEMIHKTKTGA
************************************************************
COL LLTFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLEN
N315 LLTFAVMSAADIANVDDATKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLEN
NCTC8325 LLTFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLEN
Newman LLTFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLEN
USA300_FPR3757 LLTFAVMSAADIANVDDTTKEHLESYSYHLGMMFQIKDDLLDCYGDEAKLGKKVGSDLEN
*****************:******************************************
COL NKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH
N315 NKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH
NCTC8325 NKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH
Newman NKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH
USA300_FPR3757 NKSTYVSLLGKDGAEDKLTYHRDAAVDELTQIDEQFNTKHLLEIVDLFYSRDH
*****************************************************