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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004028000
- symbol?: scpA
- synonym:
- description?: segregation and condensation protein A
- segregation and condensation protein A
- chromosome segregation and condensation protein ScpA
- ScpA/B protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4318560..4319291
- synteny block?: BlockID0030650
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1452
08BA02176:
C248_1535
11819-97:
MS7_1512 (scpA)
6850:
RSAU_001363 (scpA)
71193:
ST398NM01_1561
ECT-R 2:
ECTR2_1346
ED133:
SAOV_1497
ED98:
SAAV_1485 (scpA)
HO 5096 0412:
SAEMRSA15_14170
JH1:
SaurJH1_1583
JH9:
SaurJH9_1552
JKD6008:
SAA6008_01465 (scpA)
JKD6159:
SAA6159_01424 (scpA)
LGA251:
SARLGA251_14030
M013:
M013TW_1509
MRSA252:
SAR1571
MSHR1132:
SAMSHR1132_13340
MSSA476:
SAS1435
Mu3:
SAHV_1483
Mu50:
SAV1495
MW2:
MW1449
RF122:
SAB1356c
ST398:
SAPIG1561
T0131:
SAT0131_01588
TCH60:
HMPREF0772_11646 (scpA)
TW20:
SATW20_14930
USA300_TCH1516:
USA300HOU_1496 (scpA)
VC40:
SAVC_06725
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --------MYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVHAMKQLEIN
N315 MTQYEVDIMYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVHAMKQLEIN
NCTC8325 --------MYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVHAMKQLEIN
Newman MTQYEVDIMYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVHAMKQLEIN
USA300_FPR3757 --------MYEVKLDAFNGPLDLLLHLIQKFEIDIYDIPMQALTEQYMQYVHAMKQLEIN
****************************************************
COL IASEYLVLASELLMIKSKMLLPQSTSDMDVDDDPREDLVGRLIEYQNYKEYTAILNDMKE
N315 IASEYLVLASELLMIKSKMLLPQSTSDMDVDDDPREDLVGRLIEYQNYKEYTAILNDMKE
NCTC8325 IASEYLVLASELLMIKSKMLLPQSTSDMDVDDDPREDLVGRLIEYQNYKEYTAILNDMKE
Newman IASEYLVLASELLMIKSKMLLPQSTSDMDVDDDPREDLVGRLIEYQNYKEYTAILNDMKE
USA300_FPR3757 IASEYLVLASELLMIKSKMLLPQSTSDMDVDDDPREDLVGRLIEYQNYKEYTAILNDMKE
************************************************************
COL ERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVKNRVELNTPKSVEIRKETFT
N315 ERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVKNRVELNTPKSVEIRKETFT
NCTC8325 ERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVKNRVELNTPKSVEIRKETFT
Newman ERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVKNRVELNTPKSVEIRKETFT
USA300_FPR3757 ERDFYFTKRPTDLSHLETDESWDPNHTIDLTELIVAYQRVKNRVELNTPKSVEIRKETFT
************************************************************
COL IQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI
N315 IQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI
NCTC8325 IQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI
Newman IQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI
USA300_FPR3757 IQQATEQVTSRLKDKDHFNFFSLFTFSEPIEQVVTHFLAILEMSKAGIINIEQQRNFEDI
************************************************************
COL NIIRGVNYHFG
N315 NIIRGVNYHFG
NCTC8325 NIIRGVNYHFG
Newman NIIRGVNYHFG
USA300_FPR3757 NIIRGVNYHFG
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